Click here to switch to the map view.

The map label for this gene is pilO

Identifier: 59712902

GI number: 59712902

Start: 2577937

End: 2578515

Strand: Reverse

Name: pilO

Synonym: VF_2295

Alternate gene names: NA

Gene position: 2578515-2577937 (Counterclockwise)

Preceding gene: 59712903

Following gene: 59712901

Centisome position: 88.99

GC content: 38.17

Gene sequence:

>579_bases
ATGGATTGGCGTGAATTAGATTTAGATGAAATTACGGAATGGCCGATTATTCCGCAGCTGTTAGTGATCTTGTTGTTGTG
TTTATGTATTCAAGGGGCTGGATACTGGTTTTGGTTACAACCAATACAAGAAAGTATCGAGCAGTCAAAATTGGATGAAA
TAAGTTTAAAAACAACGGTGAAATATAAATATAACCAAGTTGCTGCTATGCCTAAAATGAAAGATCAATTGAATGAATTG
AATCTACGATATGAGTTTTTATCGCAGCAGCTACCCGCTCAAAAAGAGTTAGCAAGCATGCTTTCGGGTATCAACCAAGT
TGGTATCCAAAATAAGCTCACTTTTACTCGGATTGACTGGGGGGAGAAGCAAAATAAAACCTTTTTATATAAGTTACCTC
TGAATATTGAGCTGACAGGGCAATACCACGACATCGGCTCGTTTTCTGAAGCCATGGCTGATTTACCGCGTATTGTTAGT
TTGGAAAATATAGATATTCAAAGGGTAAGTAAGGAGAGTAGTACATTGCACTTTCGTGTAATGGCTTATACCTACCAGTT
TAGGGGGGACCATGAATAG

Upstream 100 bases:

>100_bases
TGCACTCGATTATCTCAGGGCAAAAAATATTTGGTCATGATGTCAGTAGTTTTGAAGTCTCGTTTAAATTACTTCCTCCA
GTGAAAAAGGAACCGTCGTA

Downstream 100 bases:

>100_bases
TCGGATGTTTGTTTCAGCCATAACCTTGACGTTGATGGTTGGGTGTAAAGCGAATAAGGACTCTCTTAATACTTTTTATA
CTGATGCTAAACGATCGGGA

Product: pili assembly protein PilO

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Protein PilO; Type IV Pilus Assembly Protein PilO; Pilus Assembly Protein; Tfp Pilus Assembly Protein PilO; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Pili Assembly Protein PilO; Type 4 Fimbrial Biogenesis Protein; Fimbrial Assembly Protein PilO-Like Protein

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDWRELDLDEITEWPIIPQLLVILLLCLCIQGAGYWFWLQPIQESIEQSKLDEISLKTTVKYKYNQVAAMPKMKDQLNEL
NLRYEFLSQQLPAQKELASMLSGINQVGIQNKLTFTRIDWGEKQNKTFLYKLPLNIELTGQYHDIGSFSEAMADLPRIVS
LENIDIQRVSKESSTLHFRVMAYTYQFRGDHE

Sequences:

>Translated_192_residues
MDWRELDLDEITEWPIIPQLLVILLLCLCIQGAGYWFWLQPIQESIEQSKLDEISLKTTVKYKYNQVAAMPKMKDQLNEL
NLRYEFLSQQLPAQKELASMLSGINQVGIQNKLTFTRIDWGEKQNKTFLYKLPLNIELTGQYHDIGSFSEAMADLPRIVS
LENIDIQRVSKESSTLHFRVMAYTYQFRGDHE
>Mature_192_residues
MDWRELDLDEITEWPIIPQLLVILLLCLCIQGAGYWFWLQPIQESIEQSKLDEISLKTTVKYKYNQVAAMPKMKDQLNEL
NLRYEFLSQQLPAQKELASMLSGINQVGIQNKLTFTRIDWGEKQNKTFLYKLPLNIELTGQYHDIGSFSEAMADLPRIVS
LENIDIQRVSKESSTLHFRVMAYTYQFRGDHE

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22478; Mature: 22478

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRELDLDEITEWPIIPQLLVILLLCLCIQGAGYWFWLQPIQESIEQSKLDEISLKTTV
CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHEEHEEEE
KYKYNQVAAMPKMKDQLNELNLRYEFLSQQLPAQKELASMLSGINQVGIQNKLTFTRIDW
EEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
GEKQNKTFLYKLPLNIELTGQYHDIGSFSEAMADLPRIVSLENIDIQRVSKESSTLHFRV
CCCCCCEEEEEECCEEEEECCCCCCCCHHHHHHHCHHHEEECCCCHHHHCCCCCEEEEEE
MAYTYQFRGDHE
EEEEEEECCCCC
>Mature Secondary Structure
MDWRELDLDEITEWPIIPQLLVILLLCLCIQGAGYWFWLQPIQESIEQSKLDEISLKTTV
CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHEEHEEEE
KYKYNQVAAMPKMKDQLNELNLRYEFLSQQLPAQKELASMLSGINQVGIQNKLTFTRIDW
EEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
GEKQNKTFLYKLPLNIELTGQYHDIGSFSEAMADLPRIVSLENIDIQRVSKESSTLHFRV
CCCCCCEEEEEECCEEEEECCCCCCCCHHHHHHHCHHHEEECCCCHHHHCCCCCEEEEEE
MAYTYQFRGDHE
EEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA