| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is folK [H]
Identifier: 59712775
GI number: 59712775
Start: 2438013
End: 2438498
Strand: Direct
Name: folK [H]
Synonym: VF_2168
Alternate gene names: 59712775
Gene position: 2438013-2438498 (Clockwise)
Preceding gene: 172087758
Following gene: 59712776
Centisome position: 84.14
GC content: 41.98
Gene sequence:
>486_bases ATGATCAAAGTAATTATTGCGATTGGGAGTAACCTTGGAGATCCCGTAGCTCAAGCAAAAGTGGCTATCAATGCCCTGCA CCAGCTCCCGGACTCTAAAGTAACAGCGGTATCATCGCTTTACAGCAGTTCACCTATGGGTCCTCAAGATCAACCTGACT ACATTAATGCAGTTGTTGAGATTGAAACCAACCTTGCTCCAATGGAATTACTGGATCTCACTCAAAAGATTGAGCTTGAG CAAGGTCGCGTGCGTAAGGAAGAGCGCTGGGGACCAAGAACTTTAGATCTCGATATTATTTTATTTGGCGATCAAACGAT CGACAATGAGCGATTAACCGTGCCTCACTATGGCATGAAGGAACGTGAATTTGTTCTTTATCCGCTCGCTGAAATTTATA ATGATTTAACTTTACCTGATGGCACAACCCTTTCTCAGTTACTAAAAACTGTTGATAGAAATGGTTTGTCTATTTGGGAA GATTAA
Upstream 100 bases:
>100_bases GTAACAATATGGTTCAAAATTTAAACGGTGGTCGCCGTTCTGGTGGTCCTCGTAAGCGTCGCAGCCCATATCGTAAGAAA AAAAGAGCAAATAACGACTC
Downstream 100 bases:
>100_bases TCGCTTCTAGTAAGGATGTTTTATGAAAAAAATCTCTATTCATGACTTAATGAAGTGGAAGCAAGAAGGCAAAAAATTTG CCACTGTTACAGCATATGAT
Product: 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MIKVIIAIGSNLGDPVAQAKVAINALHQLPDSKVTAVSSLYSSSPMGPQDQPDYINAVVEIETNLAPMELLDLTQKIELE QGRVRKEERWGPRTLDLDIILFGDQTIDNERLTVPHYGMKEREFVLYPLAEIYNDLTLPDGTTLSQLLKTVDRNGLSIWE D
Sequences:
>Translated_161_residues MIKVIIAIGSNLGDPVAQAKVAINALHQLPDSKVTAVSSLYSSSPMGPQDQPDYINAVVEIETNLAPMELLDLTQKIELE QGRVRKEERWGPRTLDLDIILFGDQTIDNERLTVPHYGMKEREFVLYPLAEIYNDLTLPDGTTLSQLLKTVDRNGLSIWE D >Mature_161_residues MIKVIIAIGSNLGDPVAQAKVAINALHQLPDSKVTAVSSLYSSSPMGPQDQPDYINAVVEIETNLAPMELLDLTQKIELE QGRVRKEERWGPRTLDLDIILFGDQTIDNERLTVPHYGMKEREFVLYPLAEIYNDLTLPDGTTLSQLLKTVDRNGLSIWE D
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=159, Percent_Identity=58.4905660377358, Blast_Score=195, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6324073, Length=141, Percent_Identity=41.1347517730496, Blast_Score=101, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 18017; Mature: 18017
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00794 HPPK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVIIAIGSNLGDPVAQAKVAINALHQLPDSKVTAVSSLYSSSPMGPQDQPDYINAVVE CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEE IETNLAPMELLDLTQKIELEQGRVRKEERWGPRTLDLDIILFGDQTIDNERLTVPHYGMK EECCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEEEECCCCCCCCEEECCCCCCC EREFVLYPLAEIYNDLTLPDGTTLSQLLKTVDRNGLSIWED CCCEEEEEHHHHHCCCCCCCCCCHHHHHHHHCCCCCEECCC >Mature Secondary Structure MIKVIIAIGSNLGDPVAQAKVAINALHQLPDSKVTAVSSLYSSSPMGPQDQPDYINAVVE CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEE IETNLAPMELLDLTQKIELEQGRVRKEERWGPRTLDLDIILFGDQTIDNERLTVPHYGMK EECCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEEEECCCCCCCCEEECCCCCCC EREFVLYPLAEIYNDLTLPDGTTLSQLLKTVDRNGLSIWED CCCEEEEEHHHHHCCCCCCCCCCHHHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1325970; 8202364; 9278503; 1657875; 2537812; 10378268; 10452528 [H]