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The map label for this gene is ygfB [C]

Identifier: 59712709

GI number: 59712709

Start: 2337920

End: 2338489

Strand: Reverse

Name: ygfB [C]

Synonym: VF_2102

Alternate gene names: 59712709

Gene position: 2338489-2337920 (Counterclockwise)

Preceding gene: 59712714

Following gene: 59712708

Centisome position: 80.71

GC content: 38.6

Gene sequence:

>570_bases
ATGAGCGAAATTAAAATGCCAGAGTTTTTAACCGTTGAGTCAGCTTTAAAAGACAGTGGACTTGCAGTTACACCATCAGA
ATTGCATGGTCTATTAGTTGGCATGATAAGCGGTGGTCTATCTCTTGACGATCAAACCTGGAAGCCATTGATTTATGATT
ACACTAACGATGGTATGGGATGGCCAGACAGTGCAATTAAAGTGGGAAGTGCGGTATTTCAATGCACAGTTGCTGAATTA
ACGGCTGAAAAGCTGGCTTTAGAGTTGTTAATCCCTAGTGAGAAAGAGAGCTTAATGAATCGAGCAGATGGGTTAAGTGA
GTGGGTTAACCATTTTATCTCTGGTTTAGGTTTAGTTGAGCTTAAATTAGATAAAACATCTGATGCATTGAAAGAAGCGT
TAGCTGATTTAGAAGAAATTGCACGTTTAGGTATTGATGAAGAGGATGATCTTGAAGAACAAGAAAGTCTCTTCGAACAA
ATAGTAGAGCATGTGCGCATTTGTGTTCTTACTATTCATGCTGAATTAGGTCAGCAAATACATACCGATGCATCTAAAAC
AGTGCATTAA

Upstream 100 bases:

>100_bases
TCTGATGAAAAGATACTCAATTGCGAGAGATAGTGAGTTTTCTGAAAATGCATGAAGTGGTAGCATGGAGATATTAATCC
TAATCTAGAGATCGTCAAAT

Downstream 100 bases:

>100_bases
TGGATTCTAGAATGACACATTATGATGTAGTTATTGTTGGTGGTGCGATGGCGGGAGCAACACTCGCTTTAGCATTAGAA
AAAATGAATCAAGGGCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSEIKMPEFLTVESALKDSGLAVTPSELHGLLVGMISGGLSLDDQTWKPLIYDYTNDGMGWPDSAIKVGSAVFQCTVAEL
TAEKLALELLIPSEKESLMNRADGLSEWVNHFISGLGLVELKLDKTSDALKEALADLEEIARLGIDEEDDLEEQESLFEQ
IVEHVRICVLTIHAELGQQIHTDASKTVH

Sequences:

>Translated_189_residues
MSEIKMPEFLTVESALKDSGLAVTPSELHGLLVGMISGGLSLDDQTWKPLIYDYTNDGMGWPDSAIKVGSAVFQCTVAEL
TAEKLALELLIPSEKESLMNRADGLSEWVNHFISGLGLVELKLDKTSDALKEALADLEEIARLGIDEEDDLEEQESLFEQ
IVEHVRICVLTIHAELGQQIHTDASKTVH
>Mature_188_residues
SEIKMPEFLTVESALKDSGLAVTPSELHGLLVGMISGGLSLDDQTWKPLIYDYTNDGMGWPDSAIKVGSAVFQCTVAELT
AEKLALELLIPSEKESLMNRADGLSEWVNHFISGLGLVELKLDKTSDALKEALADLEEIARLGIDEEDDLEEQESLFEQI
VEHVRICVLTIHAELGQQIHTDASKTVH

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family

Homologues:

Organism=Escherichia coli, GI87082182, Length=170, Percent_Identity=39.4117647058824, Blast_Score=114, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2102_VIBF1 (Q5E2Z9)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_205485.1
- HSSP:   P44882
- ProteinModelPortal:   Q5E2Z9
- SMR:   Q5E2Z9
- STRING:   Q5E2Z9
- GeneID:   3279328
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_2102
- NMPDR:   fig|312309.3.peg.2102
- eggNOG:   COG3079
- HOGENOM:   HBG701093
- OMA:   ELMNDGQ
- PhylomeDB:   Q5E2Z9
- ProtClustDB:   PRK01736
- BioCyc:   VFIS312309:VF2102-MONOMER
- HAMAP:   MF_00346
- InterPro:   IPR011978

Pfam domain/function: PF03695 UPF0149; SSF101327 YgfB_YecA

EC number: NA

Molecular weight: Translated: 20746; Mature: 20615

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIKMPEFLTVESALKDSGLAVTPSELHGLLVGMISGGLSLDDQTWKPLIYDYTNDGMG
CCCCCCCHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC
WPDSAIKVGSAVFQCTVAELTAEKLALELLIPSEKESLMNRADGLSEWVNHFISGLGLVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEE
LKLDKTSDALKEALADLEEIARLGIDEEDDLEEQESLFEQIVEHVRICVLTIHAELGQQI
EEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTDASKTVH
HCCHHHCCC
>Mature Secondary Structure 
SEIKMPEFLTVESALKDSGLAVTPSELHGLLVGMISGGLSLDDQTWKPLIYDYTNDGMG
CCCCCCHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC
WPDSAIKVGSAVFQCTVAELTAEKLALELLIPSEKESLMNRADGLSEWVNHFISGLGLVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEE
LKLDKTSDALKEALADLEEIARLGIDEEDDLEEQESLFEQIVEHVRICVLTIHAELGQQI
EEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTDASKTVH
HCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA