| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is surE
Identifier: 59712677
GI number: 59712677
Start: 2305920
End: 2306693
Strand: Reverse
Name: surE
Synonym: VF_2070
Alternate gene names: 59712677
Gene position: 2306693-2305920 (Counterclockwise)
Preceding gene: 59712678
Following gene: 59712676
Centisome position: 79.61
GC content: 40.57
Gene sequence:
>774_bases ATGGAGACAAGAGTGAAGAAGTTACGCATTTTGCTTAGTAACGATGATGGTGTATTTGCTGAAGGGATAAATACGTTAGC TCGTGTATTAGCTGATATTGCCGATATTACGATAGTAGCCCCTGATCGTAATCGTTCTGGTGCATCAAATTCTTTAACTC TTGAATCCCCATTACGTGTTCGTCAAATTGATGAACACATTCATTCAGTGCAAGGGACACCAACCGATTGTGTTCACTTT GCATTGAATGAATTAATGAAAGATAACTTGCCTGATTTGATTATTGCAGGTATCAATCATGGAGCAAATTTAGGTGATGA TACCTTGTACTCAGGTACCGTCGCGGCTGCTACTGAAGGGCACTTTTTAGGTTTGCCTGCCATTGCAATCTCTCTGGTTG GACGCGAGCATTTTGATACGGCAGCTCAAGTAGCATTAAAAATAGTTAAGAACCATTTAGTTTCCCCACTAACCACACAA AAAGTATTAAATGTGAATGTGCCAGATTGTGAGTATGAGCAATTAATGGGCTGGGAAGTGACACGACTTGGTGCAAGGCA TCATGCAGAGAGCATGATTAAAGATACTGATCCTCGTGGTGAGACCATCTATTGGTTAGGTCCTCCAGGCAAAAAACAAG ATGCAGGTGAGGGAACGGACTTCTTTGTTGTAAAGCAGCACCGAGTATCAATAACACCATTACAAGTCGATTTAACGGCT CATGATTCATTAGGTATGATTACTGATTGGTTATCATTAGAGAGTTCTAAATAA
Upstream 100 bases:
>100_bases TTCTCATTAACTTCAGGCAGTTTTGCTACGGTAATCGTACGTGAATTGCTACAAGAAATTGAAGTTGAGCGTACTTATAG CTCAAACGATTAATATTAAT
Downstream 100 bases:
>100_bases TGCTTAATTCGCGTTCTGAATTACTAGATCAATTTTTGCGCCAACAAGGCATTAGAGACGAAGCTATTTTAGCGGCTATT CGAGAATTACCAAGAGAGCG
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues METRVKKLRILLSNDDGVFAEGINTLARVLADIADITIVAPDRNRSGASNSLTLESPLRVRQIDEHIHSVQGTPTDCVHF ALNELMKDNLPDLIIAGINHGANLGDDTLYSGTVAAATEGHFLGLPAIAISLVGREHFDTAAQVALKIVKNHLVSPLTTQ KVLNVNVPDCEYEQLMGWEVTRLGARHHAESMIKDTDPRGETIYWLGPPGKKQDAGEGTDFFVVKQHRVSITPLQVDLTA HDSLGMITDWLSLESSK
Sequences:
>Translated_257_residues METRVKKLRILLSNDDGVFAEGINTLARVLADIADITIVAPDRNRSGASNSLTLESPLRVRQIDEHIHSVQGTPTDCVHF ALNELMKDNLPDLIIAGINHGANLGDDTLYSGTVAAATEGHFLGLPAIAISLVGREHFDTAAQVALKIVKNHLVSPLTTQ KVLNVNVPDCEYEQLMGWEVTRLGARHHAESMIKDTDPRGETIYWLGPPGKKQDAGEGTDFFVVKQHRVSITPLQVDLTA HDSLGMITDWLSLESSK >Mature_257_residues METRVKKLRILLSNDDGVFAEGINTLARVLADIADITIVAPDRNRSGASNSLTLESPLRVRQIDEHIHSVQGTPTDCVHF ALNELMKDNLPDLIIAGINHGANLGDDTLYSGTVAAATEGHFLGLPAIAISLVGREHFDTAAQVALKIVKNHLVSPLTTQ KVLNVNVPDCEYEQLMGWEVTRLGARHHAESMIKDTDPRGETIYWLGPPGKKQDAGEGTDFFVVKQHRVSITPLQVDLTA HDSLGMITDWLSLESSK
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=246, Percent_Identity=57.3170731707317, Blast_Score=284, Evalue=4e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_VIBF1 (Q5E331)
Other databases:
- EMBL: CP000020 - RefSeq: YP_205453.1 - ProteinModelPortal: Q5E331 - SMR: Q5E331 - STRING: Q5E331 - GeneID: 3279391 - GenomeReviews: CP000020_GR - KEGG: vfi:VF_2070 - NMPDR: fig|312309.3.peg.2068 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: NGFYYVN - PhylomeDB: Q5E331 - ProtClustDB: PRK00346 - BioCyc: VFIS312309:VF2070-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 28054; Mature: 28054
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRVKKLRILLSNDDGVFAEGINTLARVLADIADITIVAPDRNRSGASNSLTLESPLRV CCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEECCCHHH RQIDEHIHSVQGTPTDCVHFALNELMKDNLPDLIIAGINHGANLGDDTLYSGTVAAATEG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCEEEECCCC HFLGLPAIAISLVGREHFDTAAQVALKIVKNHLVSPLTTQKVLNVNVPDCEYEQLMGWEV CEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCHHHHCCCHH TRLGARHHAESMIKDTDPRGETIYWLGPPGKKQDAGEGTDFFVVKQHRVSITPLQVDLTA HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEEEEEEEEEEC HDSLGMITDWLSLESSK CCCCCHHHHHHHCCCCC >Mature Secondary Structure METRVKKLRILLSNDDGVFAEGINTLARVLADIADITIVAPDRNRSGASNSLTLESPLRV CCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEECCCHHH RQIDEHIHSVQGTPTDCVHFALNELMKDNLPDLIIAGINHGANLGDDTLYSGTVAAATEG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCEEEECCCC HFLGLPAIAISLVGREHFDTAAQVALKIVKNHLVSPLTTQKVLNVNVPDCEYEQLMGWEV CEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCHHHHCCCHH TRLGARHHAESMIKDTDPRGETIYWLGPPGKKQDAGEGTDFFVVKQHRVSITPLQVDLTA HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEEEEEEEEEEC HDSLGMITDWLSLESSK CCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA