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The map label for this gene is 59712668

Identifier: 59712668

GI number: 59712668

Start: 2297305

End: 2297730

Strand: Reverse

Name: 59712668

Synonym: VF_2061

Alternate gene names: NA

Gene position: 2297730-2297305 (Counterclockwise)

Preceding gene: 59712669

Following gene: 59712667

Centisome position: 79.3

GC content: 37.09

Gene sequence:

>426_bases
ATGAATAATCTTATGTTTCGAATTATTGCTTTACTCTCTGGTGGATTGTTTGGTCTTGGAATGACAACATCAGGAATGGT
TGACCCTGAAAAAGTGATTGGATTTTTGGATGTTTCAGGAGTATGGGATCCAAGTTTAATGTTTGTAATGGGAGGGGCAT
TGTTGGTATTTATGCCTGCTTACTTCTTATTTATTAAGCAAAAAACAAAACCGATAAATGCGAAAGAGTTTTGTCTATCT
ACCAATAAGCGCATTGATAATAAATTGATTTCAGGTGCTGCTATTTTTGGTCTTGGTTGGGGGCTTGCTGGTATTTGTCC
TGGACCGGTCGTTTCAAGTATTGCTTTAGGAAATACCGATGTGTTTGTATTCCTATTTGCTATGATGTGTGGACTGGCTA
TGACCAATGCTTTAGCTAAAAAGTAA

Upstream 100 bases:

>100_bases
GGACGATTGTCTGTTCGCTCAATTGTCGCTACTTGTGTATTTATGCTAGTGGCTGGAATAACTGTTTTTATCCGATTACA
CGTTCTTTAAGGGAGTGATC

Downstream 100 bases:

>100_bases
ATATATATCCGTTTTTAAAAAGGCTGACCACATGGTTGGCCTTTTTTATTTCTATCTTGCTGATACGCGTATATTGATAT
TATTTGATGAAAATATTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MNNLMFRIIALLSGGLFGLGMTTSGMVDPEKVIGFLDVSGVWDPSLMFVMGGALLVFMPAYFLFIKQKTKPINAKEFCLS
TNKRIDNKLISGAAIFGLGWGLAGICPGPVVSSIALGNTDVFVFLFAMMCGLAMTNALAKK

Sequences:

>Translated_141_residues
MNNLMFRIIALLSGGLFGLGMTTSGMVDPEKVIGFLDVSGVWDPSLMFVMGGALLVFMPAYFLFIKQKTKPINAKEFCLS
TNKRIDNKLISGAAIFGLGWGLAGICPGPVVSSIALGNTDVFVFLFAMMCGLAMTNALAKK
>Mature_141_residues
MNNLMFRIIALLSGGLFGLGMTTSGMVDPEKVIGFLDVSGVWDPSLMFVMGGALLVFMPAYFLFIKQKTKPINAKEFCLS
TNKRIDNKLISGAAIFGLGWGLAGICPGPVVSSIALGNTDVFVFLFAMMCGLAMTNALAKK

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 15036; Mature: 15036

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLMFRIIALLSGGLFGLGMTTSGMVDPEKVIGFLDVSGVWDPSLMFVMGGALLVFMPA
CCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
YFLFIKQKTKPINAKEFCLSTNKRIDNKLISGAAIFGLGWGLAGICPGPVVSSIALGNTD
HHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCH
VFVFLFAMMCGLAMTNALAKK
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNLMFRIIALLSGGLFGLGMTTSGMVDPEKVIGFLDVSGVWDPSLMFVMGGALLVFMPA
CCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
YFLFIKQKTKPINAKEFCLSTNKRIDNKLISGAAIFGLGWGLAGICPGPVVSSIALGNTD
HHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCH
VFVFLFAMMCGLAMTNALAKK
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]