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The map label for this gene is yhjA [H]

Identifier: 59712662

GI number: 59712662

Start: 2286694

End: 2288079

Strand: Reverse

Name: yhjA [H]

Synonym: VF_2055

Alternate gene names: 59712662

Gene position: 2288079-2286694 (Counterclockwise)

Preceding gene: 59712663

Following gene: 59712659

Centisome position: 78.97

GC content: 39.9

Gene sequence:

>1386_bases
ATGAAAAAAATAGGATTAGTAGTTGGTTTAGGCGTCGTTGCTTATCTTGGAACGGTTTACATTGTTGATTCATCAGATGA
AGCGCTTAGCCAAAGAAAATTAGCTCAAGCACAGATTAAAGATGACCCAATCTCTTCTGCTGCGTTTAAAGTATTAACAG
AGAACGGCTGTGGTTACTGCCATACTGAAAATAGCGAAATGCCTTTTTATGCTAACTTTCCAATCGCTAAACAGATCATG
CAAAAAGATGTGGAGAGTGGACTACGTCATTTCCAATTTGATGATGTATTAAATAGTTTTCAAGTTGGCAATGAAGTTTC
AGATGTTGCCTTAGCTAAAATCAGTGGTGTATTGAATGATGAATCAATGCCACCAAAAGCGTATTTGTCGATGCACTGGA
GATCAAGTTTATCTAATGAAGAAAAACATACTCTACGCGCTTGGATAAAGCAGGAACAAAAGAATAAACACTCATTGGCT
AGTAGTGAATATAAATACGAAGCGGTTCAACCGATTAACGCACATGTCACTGTAGATGAACAAAAAGTGGCATTAGGTGA
TGCGTTATACCACGATAAACGTCTTTCTGGTGATAACACGGTAGCTTGTTCTAGCTGTCATTCATTATCAACGGGCGGAG
TAGATAGATTAACTACATCAACGGGTATTAATGGTTCAAAAGGCCCAATTAATGCGCCGACGGTGTTTAACTCATCTTAT
AATATCCACCAATTCTGGGATGGTCGTGCGAATGACTTACAAGAGCAAGCGGGTGGGCCACCGATGAATCCTATCGAGAT
GGGTTCTGCATCATGGGAGCAAATTACAGGTAAGCTTGAACTTGATGAAGAGATGAAAGCGACCTTTGCTAAGATTTACC
CTGATGGGATCACGGGTGAAAACATCACCGATGCGATTGCTGAGTTTGAGAAAACCTTGATCACTCCGAATAGCCGATTT
GACCAATTCTTAAAAGGCGATGCATTAGCATTAAATGAGCAAGAGCAACACGGCTATGAATTATTTAAACAAAACAAATG
TTCGACGTGTCATGCTGGTCAAGCAATGGGTGGACAAACGTTTGAAGTCATGGGATTAAAAGCGGATTACTTTGGTGAGC
GAGGTAATGTATCTGAGGTGGATAATGGTCGTTTTAATGTGACGAGTAAAGCACATGATATGAACCGTTTTAAAGTTCCG
ACGCTAAGAAATATTGCACTAACAGCACCTTATTTCCATGATGGTAGTGCCGAAACACTAGATGACGCAGTTGCTGCAAT
GGCGCAATACCAAGTTGGTGTGACTTTATCTAAAAGTGAAGTTGAAGATATTAGCGCTTATTTGAAAACCTTAACTGGTG
AGTACAAAGGTGAAATGCTGAATTAA

Upstream 100 bases:

>100_bases
AAGTATCGATTAAAGCGATGATTCTCATGATATTTCTTCCTTGGTAAGCCTCTTTTTTTCACTTTATCGTGTGCGCATAT
TCGTATTGCAGGAGATAATA

Downstream 100 bases:

>100_bases
TTCGGGATTCATTAAATGATAAAAGGAGATCGTACGATCTCCTTTTTTATTGGTGGGCGATCTCATCGAGAAAATCCAAT
CGTTCCTTTTCTTCTTCTGA

Product: cytochrome C peroxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MKKIGLVVGLGVVAYLGTVYIVDSSDEALSQRKLAQAQIKDDPISSAAFKVLTENGCGYCHTENSEMPFYANFPIAKQIM
QKDVESGLRHFQFDDVLNSFQVGNEVSDVALAKISGVLNDESMPPKAYLSMHWRSSLSNEEKHTLRAWIKQEQKNKHSLA
SSEYKYEAVQPINAHVTVDEQKVALGDALYHDKRLSGDNTVACSSCHSLSTGGVDRLTTSTGINGSKGPINAPTVFNSSY
NIHQFWDGRANDLQEQAGGPPMNPIEMGSASWEQITGKLELDEEMKATFAKIYPDGITGENITDAIAEFEKTLITPNSRF
DQFLKGDALALNEQEQHGYELFKQNKCSTCHAGQAMGGQTFEVMGLKADYFGERGNVSEVDNGRFNVTSKAHDMNRFKVP
TLRNIALTAPYFHDGSAETLDDAVAAMAQYQVGVTLSKSEVEDISAYLKTLTGEYKGEMLN

Sequences:

>Translated_461_residues
MKKIGLVVGLGVVAYLGTVYIVDSSDEALSQRKLAQAQIKDDPISSAAFKVLTENGCGYCHTENSEMPFYANFPIAKQIM
QKDVESGLRHFQFDDVLNSFQVGNEVSDVALAKISGVLNDESMPPKAYLSMHWRSSLSNEEKHTLRAWIKQEQKNKHSLA
SSEYKYEAVQPINAHVTVDEQKVALGDALYHDKRLSGDNTVACSSCHSLSTGGVDRLTTSTGINGSKGPINAPTVFNSSY
NIHQFWDGRANDLQEQAGGPPMNPIEMGSASWEQITGKLELDEEMKATFAKIYPDGITGENITDAIAEFEKTLITPNSRF
DQFLKGDALALNEQEQHGYELFKQNKCSTCHAGQAMGGQTFEVMGLKADYFGERGNVSEVDNGRFNVTSKAHDMNRFKVP
TLRNIALTAPYFHDGSAETLDDAVAAMAQYQVGVTLSKSEVEDISAYLKTLTGEYKGEMLN
>Mature_461_residues
MKKIGLVVGLGVVAYLGTVYIVDSSDEALSQRKLAQAQIKDDPISSAAFKVLTENGCGYCHTENSEMPFYANFPIAKQIM
QKDVESGLRHFQFDDVLNSFQVGNEVSDVALAKISGVLNDESMPPKAYLSMHWRSSLSNEEKHTLRAWIKQEQKNKHSLA
SSEYKYEAVQPINAHVTVDEQKVALGDALYHDKRLSGDNTVACSSCHSLSTGGVDRLTTSTGINGSKGPINAPTVFNSSY
NIHQFWDGRANDLQEQAGGPPMNPIEMGSASWEQITGKLELDEEMKATFAKIYPDGITGENITDAIAEFEKTLITPNSRF
DQFLKGDALALNEQEQHGYELFKQNKCSTCHAGQAMGGQTFEVMGLKADYFGERGNVSEVDNGRFNVTSKAHDMNRFKVP
TLRNIALTAPYFHDGSAETLDDAVAAMAQYQVGVTLSKSEVEDISAYLKTLTGEYKGEMLN

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789935, Length=466, Percent_Identity=47.8540772532189, Blast_Score=449, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR004852 [H]

Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]

EC number: =1.11.1.5 [H]

Molecular weight: Translated: 50663; Mature: 50663

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS51007 CYTC L=RR ; PS51008 MULTIHEME_CYTC L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGLVVGLGVVAYLGTVYIVDSSDEALSQRKLAQAQIKDDPISSAAFKVLTENGCGYC
CCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHEECCCCCEE
HTENSEMPFYANFPIAKQIMQKDVESGLRHFQFDDVLNSFQVGNEVSDVALAKISGVLND
ECCCCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
ESMPPKAYLSMHWRSSLSNEEKHTLRAWIKQEQKNKHSLASSEYKYEAVQPINAHVTVDE
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEECC
QKVALGDALYHDKRLSGDNTVACSSCHSLSTGGVDRLTTSTGINGSKGPINAPTVFNSSY
HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHEEECCCCCCCCCCCCCCEEECCCC
NIHQFWDGRANDLQEQAGGPPMNPIEMGSASWEQITGKLELDEEMKATFAKIYPDGITGE
CCCEECCCCHHHHHHHCCCCCCCHHHCCCCCHHHHCCCEEECHHHHHHHHHHCCCCCCCC
NITDAIAEFEKTLITPNSRFDQFLKGDALALNEQEQHGYELFKQNKCSTCHAGQAMGGQT
HHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCE
FEVMGLKADYFGERGNVSEVDNGRFNVTSKAHDMNRFKVPTLRNIALTAPYFHDGSAETL
EEEEECCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHHH
DDAVAAMAQYQVGVTLSKSEVEDISAYLKTLTGEYKGEMLN
HHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKIGLVVGLGVVAYLGTVYIVDSSDEALSQRKLAQAQIKDDPISSAAFKVLTENGCGYC
CCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHEECCCCCEE
HTENSEMPFYANFPIAKQIMQKDVESGLRHFQFDDVLNSFQVGNEVSDVALAKISGVLND
ECCCCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
ESMPPKAYLSMHWRSSLSNEEKHTLRAWIKQEQKNKHSLASSEYKYEAVQPINAHVTVDE
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEECC
QKVALGDALYHDKRLSGDNTVACSSCHSLSTGGVDRLTTSTGINGSKGPINAPTVFNSSY
HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHEEECCCCCCCCCCCCCCEEECCCC
NIHQFWDGRANDLQEQAGGPPMNPIEMGSASWEQITGKLELDEEMKATFAKIYPDGITGE
CCCEECCCCHHHHHHHCCCCCCCHHHCCCCCHHHHCCCEEECHHHHHHHHHHCCCCCCCC
NITDAIAEFEKTLITPNSRFDQFLKGDALALNEQEQHGYELFKQNKCSTCHAGQAMGGQT
HHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCE
FEVMGLKADYFGERGNVSEVDNGRFNVTSKAHDMNRFKVPTLRNIALTAPYFHDGSAETL
EEEEECCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHHH
DDAVAAMAQYQVGVTLSKSEVEDISAYLKTLTGEYKGEMLN
HHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]