| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712659
Identifier: 59712659
GI number: 59712659
Start: 2283530
End: 2284156
Strand: Reverse
Name: 59712659
Synonym: VF_2052
Alternate gene names: NA
Gene position: 2284156-2283530 (Counterclockwise)
Preceding gene: 59712662
Following gene: 172087747
Centisome position: 78.83
GC content: 38.76
Gene sequence:
>627_bases ATGGAATTTGTACAAAAAAATTCGACTTCAAACACTGATACTTCAAAGATGATGCACAAAGAAACACATGCAGAAAACTT GGGGATCAGCATCAAAAATGCTTCTATTGGTTTACTTTATAAAAAGCGCGTTTTTTGGCTCGTTATTTTAGTTTTTGGAA ATATTTTTTCAGGAGCTGGAATCGCGTATTTTGAAGAGATCATTACCTCATATGTTGCGTTGGTTTTCTTTTTACCACTA TTAATAGATAGCGGTGGTAATGCAGGATCGCAATCAGCAACACTAATGGTTCGAGCGCTGGCCACTGGTGATGTTCATCC CAATGATTGGGGACGAATGTTAGCAAGAGAAGTGTTTGTTGCTTTAGGTCTTGGTTTTAGTATGGCAATCGCTGTTTATT TTTTGGGGCTATATCGTGGTGGTTATGAAATCGCTATGGTCGTCGGCATCAGTATGGTAGCCATTGTGTTAATTGGTAGT TTGGTTGGAACTGTTCTGCCTTTTGTTTTGCATAAACTCAACTTGGACCCTGCATCAGCCAGTGTCCCTATGATCACATC CATTGCTGATATCTCTGGTGTATTGATTTATTTTGCTATCGCTTCTGCAATATTAGATATCGGTTAA
Upstream 100 bases:
>100_bases TCATGAACACACATCTACAGGAACCCCCAAGTTGGTGGTTTAACTTATTAAATAAATGATGTTCTGAGGATAATTACGTC TTCAGAGCAGAGGACGTATT
Downstream 100 bases:
>100_bases TCTAGTAAAAGCCCAGATATGTACTGCTCTGGGCTTTATTGTTTCTATTCTTTGCCCTTAATTTGAGGGTTGTTTTTTAT GAGCTCTTTAAATTGTTCTA
Product: magnesium transporter MgtE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MEFVQKNSTSNTDTSKMMHKETHAENLGISIKNASIGLLYKKRVFWLVILVFGNIFSGAGIAYFEEIITSYVALVFFLPL LIDSGGNAGSQSATLMVRALATGDVHPNDWGRMLAREVFVALGLGFSMAIAVYFLGLYRGGYEIAMVVGISMVAIVLIGS LVGTVLPFVLHKLNLDPASASVPMITSIADISGVLIYFAIASAILDIG
Sequences:
>Translated_208_residues MEFVQKNSTSNTDTSKMMHKETHAENLGISIKNASIGLLYKKRVFWLVILVFGNIFSGAGIAYFEEIITSYVALVFFLPL LIDSGGNAGSQSATLMVRALATGDVHPNDWGRMLAREVFVALGLGFSMAIAVYFLGLYRGGYEIAMVVGISMVAIVLIGS LVGTVLPFVLHKLNLDPASASVPMITSIADISGVLIYFAIASAILDIG >Mature_208_residues MEFVQKNSTSNTDTSKMMHKETHAENLGISIKNASIGLLYKKRVFWLVILVFGNIFSGAGIAYFEEIITSYVALVFFLPL LIDSGGNAGSQSATLMVRALATGDVHPNDWGRMLAREVFVALGLGFSMAIAVYFLGLYRGGYEIAMVVGISMVAIVLIGS LVGTVLPFVLHKLNLDPASASVPMITSIADISGVLIYFAIASAILDIG
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 22257; Mature: 22257
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFVQKNSTSNTDTSKMMHKETHAENLGISIKNASIGLLYKKRVFWLVILVFGNIFSGAG CCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCH IAYFEEIITSYVALVFFLPLLIDSGGNAGSQSATLMVRALATGDVHPNDWGRMLAREVFV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ALGLGFSMAIAVYFLGLYRGGYEIAMVVGISMVAIVLIGSLVGTVLPFVLHKLNLDPASA HHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SVPMITSIADISGVLIYFAIASAILDIG CCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEFVQKNSTSNTDTSKMMHKETHAENLGISIKNASIGLLYKKRVFWLVILVFGNIFSGAG CCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCH IAYFEEIITSYVALVFFLPLLIDSGGNAGSQSATLMVRALATGDVHPNDWGRMLAREVFV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ALGLGFSMAIAVYFLGLYRGGYEIAMVVGISMVAIVLIGSLVGTVLPFVLHKLNLDPASA HHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SVPMITSIADISGVLIYFAIASAILDIG CCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA