| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is malF2 [H]
Identifier: 59712651
GI number: 59712651
Start: 2274494
End: 2275792
Strand: Direct
Name: malF2 [H]
Synonym: VF_2044
Alternate gene names: 59712651
Gene position: 2274494-2275792 (Clockwise)
Preceding gene: 59712650
Following gene: 59712652
Centisome position: 78.5
GC content: 41.42
Gene sequence:
>1299_bases ATGAGTCAACAGTTTGTTTTCTGGCTCTCTATGGCAATCCCAGGCAGTGGACACCTTCTACTGCGTCGTATGCGCGAAGC CGTATTTGGTTTCTCGATGCTGGCCTTAGAGATATTGGTTTATATTCAATTTATTCTACCTAATTTCCGTCTATTAGCTG TTGAGCAGCCTAATGGAAAAATCACAATTGGTGCTGAGCGCTTTGTTGACGACTCTTTCCTTATTATGGTCGGTTCAACC ATTGGCGCTTTAATGCTATTGGTCTTTTTAGCTCTACACTATGCGTTTGCTCGTGATGCAAAAGATGTGAAGCGCCAAAT AGAAGAGTCTGGTTTTGCGATTACCTTTACAGAAAAGGTTCGTGGTTTATCGCACGAAATCGTTCCTAATTTAATTACAG CACCTAAATTTATTCTTCTGTTCATCTTTGCCTTACTACCTGCAATTGTGTCGATAGTGGTAGCTTTCACCAACTATAAA CGCCCGATTTTACCTCCAGCGTTTTTAATTGAATGGAAAGGATTAACCAACTTCGAGCGTCTATTTACCAGTGAACGAAC AGCAGCAGCGTTTCAGGAAACATTAACTTGGACACTGACGTGGACTTTCTGTGCTTCAGCATTAACCATCATCTTAGGTA CTTTGCTGGCTGTTGTGGCAAACAATAAACACATTCGTGGTAAAAAGTTTTTCCGCACCGTTTACATTTTACCTTGGGCT GTTCCTGCGTTTTTAACCATCTTAGTTTTCCAACTCTTTTTCTCAAAAGTGGGTGGAATGAATACCATGGTGATCCCTTT CTTTACGGGTAATGAATATGACATTAGTACCGCTATTGGGTTCTTCCTTAATGCGGACTACGCCAAAATCACCATTATTT TGATTCAAGCATGGTTGGGATTCCCATACGTGTTTATTTTAGTAACGGGCGTACTACAAACCATCCCAGATGATCTTTAT GAAGCCAGTGGCATTGATGGTGGTAACGCTTGGACTAACTTCTTTGATATTACTCTGCCATTGATTTTAATCAGTGTTGC TCCGGTATTCATCACTCAGTTCACCTTCAACTTTAACAACGTCACCATTGTTTACATGCTAGGTGAAGCAACGGTTCAAA CCGTCGGCTCTATCTACAAACCATTGGATACCATTTCATCTCTTGGTTTCCGCTTAATGATGGATGCGAAATACAACGAA GCGGCAGTTTACACCTTGATTACCAGTACGGTTGTGGGTGCGGTCGTTCTGTATTCATGGCTAAAAGCGGGCGCATTTAA AAATGAGGAAGTGATGTAA
Upstream 100 bases:
>100_bases AACGTACCAACCTCAACGGTGTCCCTATTAAATTAGGGCATCGTTGTCCTCTAAATCCGTTACATATCTACACTAACTTA ATAAAAAAGTAGGTTATAAC
Downstream 100 bases:
>100_bases TGGATAAGGCAATCAATCTTAATCATCAAACAAAAGCAACTAAGTTCAATCGCCATGTCCTCACAAAAAACCTAGGGCTA TTCTTTAGCTATGCGTTTTT
Product: maltose transport system permease protein MalF
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MSQQFVFWLSMAIPGSGHLLLRRMREAVFGFSMLALEILVYIQFILPNFRLLAVEQPNGKITIGAERFVDDSFLIMVGST IGALMLLVFLALHYAFARDAKDVKRQIEESGFAITFTEKVRGLSHEIVPNLITAPKFILLFIFALLPAIVSIVVAFTNYK RPILPPAFLIEWKGLTNFERLFTSERTAAAFQETLTWTLTWTFCASALTIILGTLLAVVANNKHIRGKKFFRTVYILPWA VPAFLTILVFQLFFSKVGGMNTMVIPFFTGNEYDISTAIGFFLNADYAKITIILIQAWLGFPYVFILVTGVLQTIPDDLY EASGIDGGNAWTNFFDITLPLILISVAPVFITQFTFNFNNVTIVYMLGEATVQTVGSIYKPLDTISSLGFRLMMDAKYNE AAVYTLITSTVVGAVVLYSWLKAGAFKNEEVM
Sequences:
>Translated_432_residues MSQQFVFWLSMAIPGSGHLLLRRMREAVFGFSMLALEILVYIQFILPNFRLLAVEQPNGKITIGAERFVDDSFLIMVGST IGALMLLVFLALHYAFARDAKDVKRQIEESGFAITFTEKVRGLSHEIVPNLITAPKFILLFIFALLPAIVSIVVAFTNYK RPILPPAFLIEWKGLTNFERLFTSERTAAAFQETLTWTLTWTFCASALTIILGTLLAVVANNKHIRGKKFFRTVYILPWA VPAFLTILVFQLFFSKVGGMNTMVIPFFTGNEYDISTAIGFFLNADYAKITIILIQAWLGFPYVFILVTGVLQTIPDDLY EASGIDGGNAWTNFFDITLPLILISVAPVFITQFTFNFNNVTIVYMLGEATVQTVGSIYKPLDTISSLGFRLMMDAKYNE AAVYTLITSTVVGAVVLYSWLKAGAFKNEEVM >Mature_431_residues SQQFVFWLSMAIPGSGHLLLRRMREAVFGFSMLALEILVYIQFILPNFRLLAVEQPNGKITIGAERFVDDSFLIMVGSTI GALMLLVFLALHYAFARDAKDVKRQIEESGFAITFTEKVRGLSHEIVPNLITAPKFILLFIFALLPAIVSIVVAFTNYKR PILPPAFLIEWKGLTNFERLFTSERTAAAFQETLTWTLTWTFCASALTIILGTLLAVVANNKHIRGKKFFRTVYILPWAV PAFLTILVFQLFFSKVGGMNTMVIPFFTGNEYDISTAIGFFLNADYAKITIILIQAWLGFPYVFILVTGVLQTIPDDLYE ASGIDGGNAWTNFFDITLPLILISVAPVFITQFTFNFNNVTIVYMLGEATVQTVGSIYKPLDTISSLGFRLMMDAKYNEA AVYTLITSTVVGAVVLYSWLKAGAFKNEEVM
Specific function: Part of the binding-protein-dependent transport system for maltodextrin; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=226, Percent_Identity=35.3982300884956, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1787570, Length=218, Percent_Identity=28.4403669724771, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1789861, Length=222, Percent_Identity=27.4774774774775, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR007829 [H]
Pfam domain/function: PF00528 BPD_transp_1; PF05154 TM2 [H]
EC number: NA
Molecular weight: Translated: 48362; Mature: 48231
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQFVFWLSMAIPGSGHLLLRRMREAVFGFSMLALEILVYIQFILPNFRLLAVEQPNGK CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC ITIGAERFVDDSFLIMVGSTIGALMLLVFLALHYAFARDAKDVKRQIEESGFAITFTEKV EEECHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEHHHH RGLSHEIVPNLITAPKFILLFIFALLPAIVSIVVAFTNYKRPILPPAFLIEWKGLTNFER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHH LFTSERTAAAFQETLTWTLTWTFCASALTIILGTLLAVVANNKHIRGKKFFRTVYILPWA HHHCHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VPAFLTILVFQLFFSKVGGMNTMVIPFFTGNEYDISTAIGFFLNADYAKITIILIQAWLG HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEHHHHHHHHHCCCHHHHHHHHHHHHHH FPYVFILVTGVLQTIPDDLYEASGIDGGNAWTNFFDITLPLILISVAPVFITQFTFNFNN HHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC VTIVYMLGEATVQTVGSIYKPLDTISSLGFRLMMDAKYNEAAVYTLITSTVVGAVVLYSW EEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH LKAGAFKNEEVM HHHCCCCCCCCC >Mature Secondary Structure SQQFVFWLSMAIPGSGHLLLRRMREAVFGFSMLALEILVYIQFILPNFRLLAVEQPNGK CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC ITIGAERFVDDSFLIMVGSTIGALMLLVFLALHYAFARDAKDVKRQIEESGFAITFTEKV EEECHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEHHHH RGLSHEIVPNLITAPKFILLFIFALLPAIVSIVVAFTNYKRPILPPAFLIEWKGLTNFER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHH LFTSERTAAAFQETLTWTLTWTFCASALTIILGTLLAVVANNKHIRGKKFFRTVYILPWA HHHCHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VPAFLTILVFQLFFSKVGGMNTMVIPFFTGNEYDISTAIGFFLNADYAKITIILIQAWLG HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEHHHHHHHHHCCCHHHHHHHHHHHHHH FPYVFILVTGVLQTIPDDLYEASGIDGGNAWTNFFDITLPLILISVAPVFITQFTFNFNN HHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC VTIVYMLGEATVQTVGSIYKPLDTISSLGFRLMMDAKYNEAAVYTLITSTVVGAVVLYSW EEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH LKAGAFKNEEVM HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8478935; 11463916 [H]