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The map label for this gene is yvaQ [H]

Identifier: 59712649

GI number: 59712649

Start: 2271197

End: 2272825

Strand: Direct

Name: yvaQ [H]

Synonym: VF_2042

Alternate gene names: 59712649

Gene position: 2271197-2272825 (Clockwise)

Preceding gene: 59712648

Following gene: 59712650

Centisome position: 78.38

GC content: 37.45

Gene sequence:

>1629_bases
ATGAAGATAAAAGATTTAAGTGTAGTAAAGAAAATATGGGGAAGTTACTTAATTGTTTTTGCCATTTTTTCAATTGTAGG
TGTATTGATAATACTTAATTTATCACGCCTTAATGACAATGTTTCGACCATCACCAATAAAAGCTTGGCTTCCATTTCTC
TGTTAAAAGGAATTCAAGTTGATATAACAAAAGTACGAAAAGATGAATTTTCACTCCTACCTAATGCCGGACATTCAAGC
ATTAATGATTGGTTAAAAGATTTAGACCAATGGAGAGCTGATGTTCAAACTGGAATTTCATCTTATGAATCTTTGGCGTT
AAGTTCTGAAGAAAGAGCTTCTTTTCAAATATTTAAAGAAACTTGGAATCAATACATTAAAGAAACTCACTCATATAATA
ACTTACTGAGCCAAGGTAACTCTACTCAAGCTAATGAAGTGGTACTATCAAGTTTTGGCACCTACAGTAAGGCACTAACA
AGCTTGGATGATACGCTGGCTCTTAATGATGTCTCTGTAAATCAAATAAGTAACGATGTACAACAAGAAGCAGACTCTAT
GCTTTATAGTACCGGGATCGGAGCACTGTTCATTGCTTCAACCATCATTTTATCTTCTCTTTTTCTTTCCCGAATTATTT
GTCGTCCAATCGACCGTGCCTTAGAGTTTGCATCAAAAATTGCCAGCGGACAGCTTAATAACCGCATTAATGAAGAAGAG
CTAACAAAAGATGAATTAGGTACTTTGCTTAAAGAGTTAGTGACAATGCAAACCAATCTAAACACGTTAGTATCTGAGAT
AAATGACTCAACTATTCAGCTAACTACAGCCGTTGAAGAAGTCAGTGCGATTTCATCTCAAACCGCATCAGGAATGCAAA
CTCAGCAAATGGAATTAAGCTCTGTTGCTTCAGCTATGACTGAGATGCAAGCTGCGGTTAATGAAGTTGCTCAAAATACA
GAAACCGGAGTAACTTCTGCTTACTCTGCATCAGAATTAGCCAAAATCGGTAATGACACTCTTAGAAAAACCATTGAAGT
GATTTCAACGGTATCTAAGCAAATTGAAACGTCAGATGAACTTGCTCAAGAGTTAGAAACCAGCTCAAATAACATTAATA
TGGTGGTTGATGTTATTCGCGGTATTGCAGAGCAGACTAACTTACTTGCACTTAATGCGGCTATTGAAGCAGCTCGAGCA
GGTGAACAAGGTCGAGGCTTTGCGGTCGTAGCTGATGAAGTACGCTCTCTTGCTCAAAGAACACAAAGTTCAACAACTCA
GATTATTGATATCATCAGCCAGCTACAAGAAAACACTCATAAAATTGGTCAATCAAGTCGTGATTGCCAAGAAGGTATTT
CATTATGTGTGAATCAAGTAAATGAAGCGGGTGAACAAATCAGTGAGATTGAACATACCGTGGATAGTATTGCTGAAATG
AGCACTCACATAGCAACCGCATGCAGTGAGCAAAACTCAGTGTCAGAAGAATTAAATAGAAGTGTTGAGTACATTAATAC
GGCCTCTTCTGAAATGACAGAAGGTGCGTCACAAACGGCAATTGCTTGTCAGGACATCAGTCGTTTAACTCATAATTTAA
AAGCCAGACTTGAACAGTTTCAGCTGTAA

Upstream 100 bases:

>100_bases
TACATAAATATCATTAAGGCTTTATTTTAACCAGTCGATATATTAGTTAGACAATTCATTAACCTTTTAAAATAGTGAGT
TATAACTAAGGTATGCAGCT

Downstream 100 bases:

>100_bases
TTAAGTTGATTTTTCACTTATGAAAATTAAGCCCAACCGATTATCGAGTTGGGCTTTTTTCATCTCACCCTACAATCTGT
TATAGCCTTCACGTTTTTTA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MKIKDLSVVKKIWGSYLIVFAIFSIVGVLIILNLSRLNDNVSTITNKSLASISLLKGIQVDITKVRKDEFSLLPNAGHSS
INDWLKDLDQWRADVQTGISSYESLALSSEERASFQIFKETWNQYIKETHSYNNLLSQGNSTQANEVVLSSFGTYSKALT
SLDDTLALNDVSVNQISNDVQQEADSMLYSTGIGALFIASTIILSSLFLSRIICRPIDRALEFASKIASGQLNNRINEEE
LTKDELGTLLKELVTMQTNLNTLVSEINDSTIQLTTAVEEVSAISSQTASGMQTQQMELSSVASAMTEMQAAVNEVAQNT
ETGVTSAYSASELAKIGNDTLRKTIEVISTVSKQIETSDELAQELETSSNNINMVVDVIRGIAEQTNLLALNAAIEAARA
GEQGRGFAVVADEVRSLAQRTQSSTTQIIDIISQLQENTHKIGQSSRDCQEGISLCVNQVNEAGEQISEIEHTVDSIAEM
STHIATACSEQNSVSEELNRSVEYINTASSEMTEGASQTAIACQDISRLTHNLKARLEQFQL

Sequences:

>Translated_542_residues
MKIKDLSVVKKIWGSYLIVFAIFSIVGVLIILNLSRLNDNVSTITNKSLASISLLKGIQVDITKVRKDEFSLLPNAGHSS
INDWLKDLDQWRADVQTGISSYESLALSSEERASFQIFKETWNQYIKETHSYNNLLSQGNSTQANEVVLSSFGTYSKALT
SLDDTLALNDVSVNQISNDVQQEADSMLYSTGIGALFIASTIILSSLFLSRIICRPIDRALEFASKIASGQLNNRINEEE
LTKDELGTLLKELVTMQTNLNTLVSEINDSTIQLTTAVEEVSAISSQTASGMQTQQMELSSVASAMTEMQAAVNEVAQNT
ETGVTSAYSASELAKIGNDTLRKTIEVISTVSKQIETSDELAQELETSSNNINMVVDVIRGIAEQTNLLALNAAIEAARA
GEQGRGFAVVADEVRSLAQRTQSSTTQIIDIISQLQENTHKIGQSSRDCQEGISLCVNQVNEAGEQISEIEHTVDSIAEM
STHIATACSEQNSVSEELNRSVEYINTASSEMTEGASQTAIACQDISRLTHNLKARLEQFQL
>Mature_542_residues
MKIKDLSVVKKIWGSYLIVFAIFSIVGVLIILNLSRLNDNVSTITNKSLASISLLKGIQVDITKVRKDEFSLLPNAGHSS
INDWLKDLDQWRADVQTGISSYESLALSSEERASFQIFKETWNQYIKETHSYNNLLSQGNSTQANEVVLSSFGTYSKALT
SLDDTLALNDVSVNQISNDVQQEADSMLYSTGIGALFIASTIILSSLFLSRIICRPIDRALEFASKIASGQLNNRINEEE
LTKDELGTLLKELVTMQTNLNTLVSEINDSTIQLTTAVEEVSAISSQTASGMQTQQMELSSVASAMTEMQAAVNEVAQNT
ETGVTSAYSASELAKIGNDTLRKTIEVISTVSKQIETSDELAQELETSSNNINMVVDVIRGIAEQTNLLALNAAIEAARA
GEQGRGFAVVADEVRSLAQRTQSSTTQIIDIISQLQENTHKIGQSSRDCQEGISLCVNQVNEAGEQISEIEHTVDSIAEM
STHIATACSEQNSVSEELNRSVEYINTASSEMTEGASQTAIACQDISRLTHNLKARLEQFQL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=366, Percent_Identity=31.4207650273224, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1788194, Length=357, Percent_Identity=30.2521008403361, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI2367378, Length=321, Percent_Identity=30.2180685358255, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1788195, Length=312, Percent_Identity=30.7692307692308, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI1789453, Length=346, Percent_Identity=30.635838150289, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59107; Mature: 59107

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKDLSVVKKIWGSYLIVFAIFSIVGVLIILNLSRLNDNVSTITNKSLASISLLKGIQV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
DITKVRKDEFSLLPNAGHSSINDWLKDLDQWRADVQTGISSYESLALSSEERASFQIFKE
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
TWNQYIKETHSYNNLLSQGNSTQANEVVLSSFGTYSKALTSLDDTLALNDVSVNQISNDV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHH
QQEADSMLYSTGIGALFIASTIILSSLFLSRIICRPIDRALEFASKIASGQLNNRINEEE
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHH
LTKDELGTLLKELVTMQTNLNTLVSEINDSTIQLTTAVEEVSAISSQTASGMQTQQMELS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHH
SVASAMTEMQAAVNEVAQNTETGVTSAYSASELAKIGNDTLRKTIEVISTVSKQIETSDE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHH
LAQELETSSNNINMVVDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
TQSSTTQIIDIISQLQENTHKIGQSSRDCQEGISLCVNQVNEAGEQISEIEHTVDSIAEM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STHIATACSEQNSVSEELNRSVEYINTASSEMTEGASQTAIACQDISRLTHNLKARLEQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QL
CC
>Mature Secondary Structure
MKIKDLSVVKKIWGSYLIVFAIFSIVGVLIILNLSRLNDNVSTITNKSLASISLLKGIQV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
DITKVRKDEFSLLPNAGHSSINDWLKDLDQWRADVQTGISSYESLALSSEERASFQIFKE
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
TWNQYIKETHSYNNLLSQGNSTQANEVVLSSFGTYSKALTSLDDTLALNDVSVNQISNDV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHH
QQEADSMLYSTGIGALFIASTIILSSLFLSRIICRPIDRALEFASKIASGQLNNRINEEE
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHH
LTKDELGTLLKELVTMQTNLNTLVSEINDSTIQLTTAVEEVSAISSQTASGMQTQQMELS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHH
SVASAMTEMQAAVNEVAQNTETGVTSAYSASELAKIGNDTLRKTIEVISTVSKQIETSDE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHH
LAQELETSSNNINMVVDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
TQSSTTQIIDIISQLQENTHKIGQSSRDCQEGISLCVNQVNEAGEQISEIEHTVDSIAEM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STHIATACSEQNSVSEELNRSVEYINTASSEMTEGASQTAIACQDISRLTHNLKARLEQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]