| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712599
Identifier: 59712599
GI number: 59712599
Start: 2225653
End: 2226747
Strand: Reverse
Name: 59712599
Synonym: VF_1992
Alternate gene names: NA
Gene position: 2226747-2225653 (Counterclockwise)
Preceding gene: 59712600
Following gene: 59712595
Centisome position: 76.85
GC content: 38.17
Gene sequence:
>1095_bases ATGACGTTATTCAAAAGAACGATTTATTTATGTATGTTGGTGCTGTTGAGTTCAACATTTGTAAATGCTGAAATCATGGA AGGTGGTAAAACCGTCCCTAGTTTTGCTCAAGATGCCACTTCAATCCGCTATACCTATGAGACTCAACTCTATACATTAC CGGCTTTTAAATCGGGTCATTATGGGTTGCGTATGTACCGTCAAACCATGGATCCAAAATATACCGCTGCTATTTGGTCA GATATGGCTCGTGTCGCAAGTCGTTTGAATCAATTTTCTTCAGAAGTTCATACACCAGAGCAAATCCAAGCCTATGCTAA AAAACGATTAAGCACGTATATTGATGATATGGATGAGCGAAGTGTTTTGCGTTATAACGCAACTAAAGTGATGCCGGAAT ATTTATACTTAGGTGTCGATTTACTGGGTTCTATGGCCAGAGCGGATGAGTATGGATTGAAGCATAAGAATGATAAACAG CTGAGAGAAATTATTCGTCGTTACGATTTTAAAAAATACGCAACAGATCCCGCGATGATTAAAGCGTGGGCTGCTCAGTT AGCTAATCAAGTATATTGGCTACGTCAACTCGGTGAGCAAGATGTGGTGAATGAGTTTGTTGATGCGTTTCGATTAACTT ATCCTGATGCTCAAGATGAGCAACTATCTGATCAGCAATTTGGCAATAAGATTTATGGATTAACTCATATCTTATTAGCT GATTCTCAGTATTATCAGCATCCAATTAAAGAGTCCGATCATCAATGGATATACGATTATCTGCGTAAAAATGCCGATAC GATTTTAAAAAGAGCGAAAGAAGATATTATTGCTGAAGTTGGTATTACTTTTTTACTTGCAGGGTTAGAAGATGATCCTG TGGTCTATAAAACACAAAAGCACATTCAAAATGCGATTAATCGTGAAAAGAACATGGTGCCATCAACGTCGAACAGCATT AATCTTAAAGAGGGTGAGCATAGGAACGTATTAGCGATTATGTTACTGGATTGGCAGACACCTAATGCTGCACCAACGAT TCAAAATCAACCCCAAATATTCATTAGTAAGCCATACGGCCTTGTGAAAAAGTAA
Upstream 100 bases:
>100_bases ATTAACGTCTCAATTCTTTGACACCCAATTGACTATTTTTGTTCTCTTTAGCTTAATATCTAACCAGTAAGTTATGGTGG AATTGAATAAAGAGGGATAT
Downstream 100 bases:
>100_bases GCTCTGTAAGCCTGATAGAAAAATGCCCAGAGATAGTGATATCGCTGGGCATTTTTATTTGGTTCAGAAGAGATGATTAC TTTACGCTAGACCTTGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTLFKRTIYLCMLVLLSSTFVNAEIMEGGKTVPSFAQDATSIRYTYETQLYTLPAFKSGHYGLRMYRQTMDPKYTAAIWS DMARVASRLNQFSSEVHTPEQIQAYAKKRLSTYIDDMDERSVLRYNATKVMPEYLYLGVDLLGSMARADEYGLKHKNDKQ LREIIRRYDFKKYATDPAMIKAWAAQLANQVYWLRQLGEQDVVNEFVDAFRLTYPDAQDEQLSDQQFGNKIYGLTHILLA DSQYYQHPIKESDHQWIYDYLRKNADTILKRAKEDIIAEVGITFLLAGLEDDPVVYKTQKHIQNAINREKNMVPSTSNSI NLKEGEHRNVLAIMLLDWQTPNAAPTIQNQPQIFISKPYGLVKK
Sequences:
>Translated_364_residues MTLFKRTIYLCMLVLLSSTFVNAEIMEGGKTVPSFAQDATSIRYTYETQLYTLPAFKSGHYGLRMYRQTMDPKYTAAIWS DMARVASRLNQFSSEVHTPEQIQAYAKKRLSTYIDDMDERSVLRYNATKVMPEYLYLGVDLLGSMARADEYGLKHKNDKQ LREIIRRYDFKKYATDPAMIKAWAAQLANQVYWLRQLGEQDVVNEFVDAFRLTYPDAQDEQLSDQQFGNKIYGLTHILLA DSQYYQHPIKESDHQWIYDYLRKNADTILKRAKEDIIAEVGITFLLAGLEDDPVVYKTQKHIQNAINREKNMVPSTSNSI NLKEGEHRNVLAIMLLDWQTPNAAPTIQNQPQIFISKPYGLVKK >Mature_363_residues TLFKRTIYLCMLVLLSSTFVNAEIMEGGKTVPSFAQDATSIRYTYETQLYTLPAFKSGHYGLRMYRQTMDPKYTAAIWSD MARVASRLNQFSSEVHTPEQIQAYAKKRLSTYIDDMDERSVLRYNATKVMPEYLYLGVDLLGSMARADEYGLKHKNDKQL REIIRRYDFKKYATDPAMIKAWAAQLANQVYWLRQLGEQDVVNEFVDAFRLTYPDAQDEQLSDQQFGNKIYGLTHILLAD SQYYQHPIKESDHQWIYDYLRKNADTILKRAKEDIIAEVGITFLLAGLEDDPVVYKTQKHIQNAINREKNMVPSTSNSIN LKEGEHRNVLAIMLLDWQTPNAAPTIQNQPQIFISKPYGLVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42178; Mature: 42046
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFKRTIYLCMLVLLSSTFVNAEIMEGGKTVPSFAQDATSIRYTYETQLYTLPAFKSGH CCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHEEEEEEEEEEECCCCCCCC YGLRMYRQTMDPKYTAAIWSDMARVASRLNQFSSEVHTPEQIQAYAKKRLSTYIDDMDER HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC SVLRYNATKVMPEYLYLGVDLLGSMARADEYGLKHKNDKQLREIIRRYDFKKYATDPAMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCHHHH KAWAAQLANQVYWLRQLGEQDVVNEFVDAFRLTYPDAQDEQLSDQQFGNKIYGLTHILLA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHC DSQYYQHPIKESDHQWIYDYLRKNADTILKRAKEDIIAEVGITFLLAGLEDDPVVYKTQK CCHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEHHHH HIQNAINREKNMVPSTSNSINLKEGEHRNVLAIMLLDWQTPNAAPTIQNQPQIFISKPYG HHHHHHHHHHCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCC LVKK CCCC >Mature Secondary Structure TLFKRTIYLCMLVLLSSTFVNAEIMEGGKTVPSFAQDATSIRYTYETQLYTLPAFKSGH CHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHEEEEEEEEEEECCCCCCCC YGLRMYRQTMDPKYTAAIWSDMARVASRLNQFSSEVHTPEQIQAYAKKRLSTYIDDMDER HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC SVLRYNATKVMPEYLYLGVDLLGSMARADEYGLKHKNDKQLREIIRRYDFKKYATDPAMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCHHHH KAWAAQLANQVYWLRQLGEQDVVNEFVDAFRLTYPDAQDEQLSDQQFGNKIYGLTHILLA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHC DSQYYQHPIKESDHQWIYDYLRKNADTILKRAKEDIIAEVGITFLLAGLEDDPVVYKTQK CCHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEHHHH HIQNAINREKNMVPSTSNSINLKEGEHRNVLAIMLLDWQTPNAAPTIQNQPQIFISKPYG HHHHHHHHHHCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCC LVKK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA