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The map label for this gene is yfgO [H]

Identifier: 59712528

GI number: 59712528

Start: 2149722

End: 2150786

Strand: Reverse

Name: yfgO [H]

Synonym: VF_1921

Alternate gene names: 59712528

Gene position: 2150786-2149722 (Counterclockwise)

Preceding gene: 172087734

Following gene: 59712525

Centisome position: 74.23

GC content: 37.93

Gene sequence:

>1065_bases
ATGTTAGATATGGTTACCCAGTGGTATAAGCGCCGCTTTTCAGATCCTCATGCTGTTAGTTTGGCTGCTATCCTTATTGT
TGGCTTTATTACTATTTACTTTTTTGGTCACTTAATTGCGCCATTGTTAGTTGCCATAGTCTTAGCGTATTTATTAGAGT
GGCCTGTTGCTAAACTAACTCGCATTGGTTTACCAAGAGTACTCTCAGTAATGTTGGTTATTATCTTGTTTATTAGTCTC
ATGTTATTGGCTGTTTTTGGTCTAGTTCCGACTATTTGGACGCAAGTAGGTAACTTAATTAATGATGTTCCATCCATGTT
TAATGGCTTAAATAGTTTCTTATCAAGTTTACCTGAGCGTTACCCTGAATTTATTCAACCTCAATCAATCGAGACTCTAT
TAGAAACAATACGAGTTAAAGTACTTGGTATGGGAGAGAGCATAGTCAAAGGCTCGCTATCATCATTAGTAAGTTTAGCA
GCGCTTGGTGTTTATCTTATTCTTGTACCACTGCTAGTGTTTTTCTTATTAAAAGATAAAGATGAGATGGTTGGCACTAT
GAGTAATCTTTTACCTAAAAATCGTCGTCTGGCGACGAAAGTGTGGTTGGAGATGAATGAACAGATAAGTAATTACATTC
GAGGTAAAGTCGTCGAAATTTTAATTGTAGGGACTGTCAGCTATTTAACCTTCTTTATTATGGATTTACGTTACGCCTTA
TTACTGGCCGTAATGGTGGGGTTTTCTGTGCTTATTCCTTATATTGGCGCTGCGGCTGTAACGGTTCCTATTGCGATTGT
TGCTCTATTCCAATGGGGGTTAACGCCAGATTTTTATTGGTTATTGTTAGCTTATGCCATCATTCAGGCTCTGGATGGTA
ATGTGTTGGTTCCCGTTTTATTTTCTGAAGCGGTTAATTTACATCCTGTGGCTATTATTGTTTCTGTTTTAGTCTTTGGT
GGATTATGGGGCTTTTGGGGCGTGTTTTTTGCAATTCCATTAGCAACATTAGTGAAAGCTGTGTGGAAAGCGCTTCCTGC
AACAGAAATAGAAGCGAATTATTAA

Upstream 100 bases:

>100_bases
CCGATATGATTGCTTATTTTGAACGTCAGTTATTTGAAGTTCGCCTAGAGCATGCAGATGCTTATTCGTTTTTAACCGTA
ATTAAAAAGTAGAAATTGTT

Downstream 100 bases:

>100_bases
TACGGCAATAAAAAAGGCGATACTCGTGATATCGCCTTTAATTTTTATAAGTTTAAATTATTTATTATTCAAATAATCTA
ATACTACTTCATGGTGATCT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MLDMVTQWYKRRFSDPHAVSLAAILIVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLTRIGLPRVLSVMLVIILFISL
MLLAVFGLVPTIWTQVGNLINDVPSMFNGLNSFLSSLPERYPEFIQPQSIETLLETIRVKVLGMGESIVKGSLSSLVSLA
ALGVYLILVPLLVFFLLKDKDEMVGTMSNLLPKNRRLATKVWLEMNEQISNYIRGKVVEILIVGTVSYLTFFIMDLRYAL
LLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLLLAYAIIQALDGNVLVPVLFSEAVNLHPVAIIVSVLVFG
GLWGFWGVFFAIPLATLVKAVWKALPATEIEANY

Sequences:

>Translated_354_residues
MLDMVTQWYKRRFSDPHAVSLAAILIVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLTRIGLPRVLSVMLVIILFISL
MLLAVFGLVPTIWTQVGNLINDVPSMFNGLNSFLSSLPERYPEFIQPQSIETLLETIRVKVLGMGESIVKGSLSSLVSLA
ALGVYLILVPLLVFFLLKDKDEMVGTMSNLLPKNRRLATKVWLEMNEQISNYIRGKVVEILIVGTVSYLTFFIMDLRYAL
LLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLLLAYAIIQALDGNVLVPVLFSEAVNLHPVAIIVSVLVFG
GLWGFWGVFFAIPLATLVKAVWKALPATEIEANY
>Mature_354_residues
MLDMVTQWYKRRFSDPHAVSLAAILIVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLTRIGLPRVLSVMLVIILFISL
MLLAVFGLVPTIWTQVGNLINDVPSMFNGLNSFLSSLPERYPEFIQPQSIETLLETIRVKVLGMGESIVKGSLSSLVSLA
ALGVYLILVPLLVFFLLKDKDEMVGTMSNLLPKNRRLATKVWLEMNEQISNYIRGKVVEILIVGTVSYLTFFIMDLRYAL
LLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLLLAYAIIQALDGNVLVPVLFSEAVNLHPVAIIVSVLVFG
GLWGFWGVFFAIPLATLVKAVWKALPATEIEANY

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=353, Percent_Identity=56.657223796034, Blast_Score=401, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39260; Mature: 39260

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDMVTQWYKRRFSDPHAVSLAAILIVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLT
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIGLPRVLSVMLVIILFISLMLLAVFGLVPTIWTQVGNLINDVPSMFNGLNSFLSSLPER
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPEFIQPQSIETLLETIRVKVLGMGESIVKGSLSSLVSLAALGVYLILVPLLVFFLLKDK
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DEMVGTMSNLLPKNRRLATKVWLEMNEQISNYIRGKVVEILIVGTVSYLTFFIMDLRYAL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLLLAYAIIQALDGNVLVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEHHHH
FSEAVNLHPVAIIVSVLVFGGLWGFWGVFFAIPLATLVKAVWKALPATEIEANY
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLDMVTQWYKRRFSDPHAVSLAAILIVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLT
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIGLPRVLSVMLVIILFISLMLLAVFGLVPTIWTQVGNLINDVPSMFNGLNSFLSSLPER
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPEFIQPQSIETLLETIRVKVLGMGESIVKGSLSSLVSLAALGVYLILVPLLVFFLLKDK
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DEMVGTMSNLLPKNRRLATKVWLEMNEQISNYIRGKVVEILIVGTVSYLTFFIMDLRYAL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLLLAYAIIQALDGNVLVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEHHHH
FSEAVNLHPVAIIVSVLVFGGLWGFWGVFFAIPLATLVKAVWKALPATEIEANY
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]