Click here to switch to the map view.

The map label for this gene is 172087734

Identifier: 172087734

GI number: 172087734

Start: 2150795

End: 2151016

Strand: Reverse

Name: 172087734

Synonym: VF_2637

Alternate gene names: NA

Gene position: 2151016-2150795 (Counterclockwise)

Preceding gene: 59712532

Following gene: 59712528

Centisome position: 74.24

GC content: 37.39

Gene sequence:

>222_bases
ATGGAAACCCAAAGCCTTGATTTAACCCAACATCGGTGCCCAATGTCTTTACTTTTGGCTAAAAGAGCAAGTCAGGCTTT
GGTGACTAATGAAATCTTACAAATTAAAGTCGTCGACAAAGCTTCTTTAGCCGATATGATTGCTTATTTTGAACGTCAGT
TATTTGAAGTTCGCCTAGAGCATGCAGATGCTTATTCGTTTTTAACCGTAATTAAAAAGTAG

Upstream 100 bases:

>100_bases
TGTCGAATAAGAGTATCAAAATTAAAATAGGTTTCTTTTTTGTATTAATTATGTGATTTATACTCTTAAATGAAATCTAT
CATATATATAGAGTGGTGGA

Downstream 100 bases:

>100_bases
AAATTGTTATGTTAGATATGGTTACCCAGTGGTATAAGCGCCGCTTTTCAGATCCTCATGCTGTTAGTTTGGCTGCTATC
CTTATTGTTGGCTTTATTAC

Product: SirA-like redox protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
METQSLDLTQHRCPMSLLLAKRASQALVTNEILQIKVVDKASLADMIAYFERQLFEVRLEHADAYSFLTVIKK

Sequences:

>Translated_73_residues
METQSLDLTQHRCPMSLLLAKRASQALVTNEILQIKVVDKASLADMIAYFERQLFEVRLEHADAYSFLTVIKK
>Mature_73_residues
METQSLDLTQHRCPMSLLLAKRASQALVTNEILQIKVVDKASLADMIAYFERQLFEVRLEHADAYSFLTVIKK

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8382; Mature: 8382

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METQSLDLTQHRCPMSLLLAKRASQALVTNEILQIKVVDKASLADMIAYFERQLFEVRLE
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHH
HADAYSFLTVIKK
HCCHHHHHHHHCC
>Mature Secondary Structure
METQSLDLTQHRCPMSLLLAKRASQALVTNEILQIKVVDKASLADMIAYFERQLFEVRLE
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHH
HADAYSFLTVIKK
HCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA