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The map label for this gene is chiP

Identifier: 59712496

GI number: 59712496

Start: 2122998

End: 2124050

Strand: Reverse

Name: chiP

Synonym: VF_1889

Alternate gene names: NA

Gene position: 2124050-2122998 (Counterclockwise)

Preceding gene: 59712497

Following gene: 59712495

Centisome position: 73.31

GC content: 38.46

Gene sequence:

>1053_bases
ATGGAAAACAAATTTTTTAAAACAACGTTATTAGGCGCAGCTGTTGCTTTAGCATCTGCTGGTGTAACAGCAAAAGAAGT
TGGTATTAACTCTGACTTTAATGTTGAAGTGTACGGTGTGGCAGCAATGTCTACTGTTAACTACAATACAACTGGTAATG
GCGATGGTACAAACGGTTATGTATTAGAAAATGAATCTCGAATTGGTTTTCGTGCACATAAAGAAATGTTTGAAAATGTA
TTAGTTACAATGCAAATTGAGTCTGGTTATGTAGATAGCTGGCAAGGTGGAGAGTTAGGTGCTCGTGATACTTACCTAGG
TCTTTCTGGTGATTGGGGTAATTTGCGTGCAGGTCGTGTACTTACACCTTTATATGAAATTATTGACTGGCCTTTCTCTA
ACCCTGGTTTAGGTTCTGTATTTGATTGGGGTGGTGTAAATGCTCACTATGATCGTCAATCAAACCAAGTTCGTTACGAC
TCTCCTAATTTTGGTGGTTTAACATTTGCTCTTTCTGCTGGTCGTGATGGAAACCCAAGTGGTTCTGCAACTCGTGATTC
TCGTTTTTTCAGTGGTAATGTGAAATATACAATCAGCACAGTAACATTAATGGGTGCTGTTGAAGGTGGTTCTGATTTCC
GCGGTGTTGATGATAATGATAATTTAACTTATTTAGTTGGTGCTGAAGTAGGTTTACCTGGTGGCTTTAGTTTAGCTGGC
GCATATAAACAAGAAAGTGTAGATAAATTCTCTGGCAAAAATGCTGCGGGTGTAGCGGTTTCTGGTGAAAATGTAGATCA
AGGGTCTTTTTCTGTAATTGGTCAGTATTGGCTTGATTCATTAGGTTTTAAAGTTGGTTATGCTGCTAACTTAGATGCTG
ATGGAATAAAAACGGTTGGACTAAAAGAAGAATCTTTGGATTCGAATACAATTTCAGGGCAAGTAATGTATGTGCATAAT
GGTTTTGTTCCATACCTACGTGTAGCTGGTCGTACTGTAGGAGATAAAGATACTGATATCGTAACTCGTGTAGGTTTAGA
GTACGGTTTCTAA

Upstream 100 bases:

>100_bases
AAATTGTGTGAATGAGGAGATTTATTTATTGCTTTCGGCGGCCAACTTAAAGCCAATAAATAATGAACACAGCTATATCC
ATTTTTAGGAGCTTTATTCC

Downstream 100 bases:

>100_bases
GGTATACTGTTACTTAGTTAATCTTTAAAACGCTAGCGAATTGCTGGCGTTTTTATTTTAAGAGCATTTGAAATTTAAGG
TGTATAAAATGTATAAAAAA

Product: chitoporin ChiP

Products: NA

Alternate protein names: Chitoporin; Outer Membrane Porin Protein; Chitoporin ChiP

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MENKFFKTTLLGAAVALASAGVTAKEVGINSDFNVEVYGVAAMSTVNYNTTGNGDGTNGYVLENESRIGFRAHKEMFENV
LVTMQIESGYVDSWQGGELGARDTYLGLSGDWGNLRAGRVLTPLYEIIDWPFSNPGLGSVFDWGGVNAHYDRQSNQVRYD
SPNFGGLTFALSAGRDGNPSGSATRDSRFFSGNVKYTISTVTLMGAVEGGSDFRGVDDNDNLTYLVGAEVGLPGGFSLAG
AYKQESVDKFSGKNAAGVAVSGENVDQGSFSVIGQYWLDSLGFKVGYAANLDADGIKTVGLKEESLDSNTISGQVMYVHN
GFVPYLRVAGRTVGDKDTDIVTRVGLEYGF

Sequences:

>Translated_350_residues
MENKFFKTTLLGAAVALASAGVTAKEVGINSDFNVEVYGVAAMSTVNYNTTGNGDGTNGYVLENESRIGFRAHKEMFENV
LVTMQIESGYVDSWQGGELGARDTYLGLSGDWGNLRAGRVLTPLYEIIDWPFSNPGLGSVFDWGGVNAHYDRQSNQVRYD
SPNFGGLTFALSAGRDGNPSGSATRDSRFFSGNVKYTISTVTLMGAVEGGSDFRGVDDNDNLTYLVGAEVGLPGGFSLAG
AYKQESVDKFSGKNAAGVAVSGENVDQGSFSVIGQYWLDSLGFKVGYAANLDADGIKTVGLKEESLDSNTISGQVMYVHN
GFVPYLRVAGRTVGDKDTDIVTRVGLEYGF
>Mature_350_residues
MENKFFKTTLLGAAVALASAGVTAKEVGINSDFNVEVYGVAAMSTVNYNTTGNGDGTNGYVLENESRIGFRAHKEMFENV
LVTMQIESGYVDSWQGGELGARDTYLGLSGDWGNLRAGRVLTPLYEIIDWPFSNPGLGSVFDWGGVNAHYDRQSNQVRYD
SPNFGGLTFALSAGRDGNPSGSATRDSRFFSGNVKYTISTVTLMGAVEGGSDFRGVDDNDNLTYLVGAEVGLPGGFSLAG
AYKQESVDKFSGKNAAGVAVSGENVDQGSFSVIGQYWLDSLGFKVGYAANLDADGIKTVGLKEESLDSNTISGQVMYVHN
GFVPYLRVAGRTVGDKDTDIVTRVGLEYGF

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37282; Mature: 37282

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKFFKTTLLGAAVALASAGVTAKEVGINSDFNVEVYGVAAMSTVNYNTTGNGDGTNGY
CCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCE
VLENESRIGFRAHKEMFENVLVTMQIESGYVDSWQGGELGARDTYLGLSGDWGNLRAGRV
EEECCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCH
LTPLYEIIDWPFSNPGLGSVFDWGGVNAHYDRQSNQVRYDSPNFGGLTFALSAGRDGNPS
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCCCC
GSATRDSRFFSGNVKYTISTVTLMGAVEGGSDFRGVDDNDNLTYLVGAEVGLPGGFSLAG
CCCCCCCEEEECCEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEECC
AYKQESVDKFSGKNAAGVAVSGENVDQGSFSVIGQYWLDSLGFKVGYAANLDADGIKTVG
CHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEC
LKEESLDSNTISGQVMYVHNGFVPYLRVAGRTVGDKDTDIVTRVGLEYGF
CCHHCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCHHHEEECCCCCC
>Mature Secondary Structure
MENKFFKTTLLGAAVALASAGVTAKEVGINSDFNVEVYGVAAMSTVNYNTTGNGDGTNGY
CCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCE
VLENESRIGFRAHKEMFENVLVTMQIESGYVDSWQGGELGARDTYLGLSGDWGNLRAGRV
EEECCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCH
LTPLYEIIDWPFSNPGLGSVFDWGGVNAHYDRQSNQVRYDSPNFGGLTFALSAGRDGNPS
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCCCC
GSATRDSRFFSGNVKYTISTVTLMGAVEGGSDFRGVDDNDNLTYLVGAEVGLPGGFSLAG
CCCCCCCEEEECCEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEECC
AYKQESVDKFSGKNAAGVAVSGENVDQGSFSVIGQYWLDSLGFKVGYAANLDADGIKTVG
CHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEC
LKEESLDSNTISGQVMYVHNGFVPYLRVAGRTVGDKDTDIVTRVGLEYGF
CCHHCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA