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The map label for this gene is flgC [H]

Identifier: 59712483

GI number: 59712483

Start: 2111198

End: 2111614

Strand: Reverse

Name: flgC [H]

Synonym: VF_1876

Alternate gene names: 59712483

Gene position: 2111614-2111198 (Counterclockwise)

Preceding gene: 59712484

Following gene: 59712482

Centisome position: 72.88

GC content: 39.81

Gene sequence:

>417_bases
ATGAGCTTATTTAATGTTTTTAACGTTACAGGTTCTGCAATGAGTGCAGAATCAGTTCGTCTTAACACCACTTCAAGTAA
CATGGCAAACGCAGACAGTGTAAGTAGCTCAGCTGCTGAAACTTATAAAGCACGCCAGGCTGTTTTTGGTGCGGAATTGA
GCAAAGCAAAATACAAACAAGATCATACAGTTCCTGTAAAAGTTCTTGGTATTGTTGAAAGCCAAAAGCCTCTACGTGCA
GAATATAACCCAGACCATCCTATGGCAAATGACGATGGCTATATCTTTAAGCCAAACGTTAATGTGATGGAAGAAATGGC
AAACATGATTTCTGCTTCTCGTTCATACCAAACGAATGTTCAAGTTGCAGATGCGAGTAAACAAATGTTGCAGAGTACTC
TGCGAATGGGTCAATAA

Upstream 100 bases:

>100_bases
GTAACTTGTTTATGCAAAACCAACTTCGTCATCAAGCATCATTAGACTTTTTAGGTAGCAAGTTCAAAAACCTAACCAAA
GCAATTAAAGGGGAATAGAG

Downstream 100 bases:

>100_bases
GGATAGGAGGTAGCTATGACTGGAATCAATAACGTTGGTCAAAACGGCTTGTCCTACATCGACCAGTTAAAGAGTCTTCA
AGAGGCGAACAAAACTGAAA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSLFNVFNVTGSAMSAESVRLNTTSSNMANADSVSSSAAETYKARQAVFGAELSKAKYKQDHTVPVKVLGIVESQKPLRA
EYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNVQVADASKQMLQSTLRMGQ

Sequences:

>Translated_138_residues
MSLFNVFNVTGSAMSAESVRLNTTSSNMANADSVSSSAAETYKARQAVFGAELSKAKYKQDHTVPVKVLGIVESQKPLRA
EYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNVQVADASKQMLQSTLRMGQ
>Mature_137_residues
SLFNVFNVTGSAMSAESVRLNTTSSNMANADSVSSSAAETYKARQAVFGAELSKAKYKQDHTVPVKVLGIVESQKPLRAE
YNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNVQVADASKQMLQSTLRMGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=138, Percent_Identity=44.9275362318841, Blast_Score=123, Evalue=5e-30,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15075; Mature: 14944

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFNVFNVTGSAMSAESVRLNTTSSNMANADSVSSSAAETYKARQAVFGAELSKAKYKQ
CCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
DHTVPVKVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNV
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCE
QVADASKQMLQSTLRMGQ
EEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLFNVFNVTGSAMSAESVRLNTTSSNMANADSVSSSAAETYKARQAVFGAELSKAKYKQ
CCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
DHTVPVKVLGIVESQKPLRAEYNPDHPMANDDGYIFKPNVNVMEEMANMISASRSYQTNV
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCE
QVADASKQMLQSTLRMGQ
EEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA