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The map label for this gene is fliM [H]

Identifier: 59712452

GI number: 59712452

Start: 2076649

End: 2077683

Strand: Reverse

Name: fliM [H]

Synonym: VF_1845

Alternate gene names: 59712452

Gene position: 2077683-2076649 (Counterclockwise)

Preceding gene: 59712453

Following gene: 59712451

Centisome position: 71.71

GC content: 42.03

Gene sequence:

>1035_bases
GTGACAGATCTACTATCCCAAGACGAAATTGATGCTCTACTCCACGGTGTAGATGATGTAGAAGATGATGTTGTCGGTAA
TGATGACAATGTAGGCTCGATGAAGAGCTTTGATTTCTCATCACAAGACCGAATCGTTCGTGGTCGAATGCCAACACTGG
AATTGATTAACGAGCGCTTTGCACGCCATATGCGTATTAGCTTATTTAATATGTTAAGAAAAACCGCTGAAGTATCGATT
AACGGTGTTTCAATGGTGAAGTTTGGTGAGTATCAAAATACCTTATATGTACCAACCAGTTTAAACATGGTGCGTTTCCG
TCCACTTAAAGGTACCGCTTTAGTAACGATGGAAGCTCGATTAGTGTTTATTTTGGTAGAGAACTTCTTTGGTGGTGACG
GTCGTTTCCACGCTAAGATCGAAGGTCGTGAATTTACCCCAACTGAACGTCGTATCATTCAATTATTGCTAAAAGTGATT
TTTGAAGATTACAAAGAAGCTTGGTCGCCAGTTATGGGGGTCGAGTTTGAGTACCTTGACTCAGAAGTGAACCCAACCAT
GGCAAACATCGTGAGCCCGACAGAGGTTATCGTTGTAAGTTCATTCCATATTGAAGTGGATGGCGGTGGTGGTGATTTCC
ACGTTGTTTTCCCATATTCAATGGTTGAACCTATCCGTGAGTTACTGGATGCCGGTGTACAAAGTGACAAGATGGACACT
GATGTTCGTTGGAGCAAGGCATTGCGTGACGAAATCATGGATGTTCCAGTTGAAATGAAAGTGAATCTATTAGAAAGCCA
AATCTCATTACGCGATCTAATGGAGCTGGAAGCTGGCGATATCATCCCAGTAGAAATGCCAGAAGCAGCAACCGTATTTG
TAGAAGACCTACCAACTTACCGCGGTAAAGTCGGTCAATCTAACGACAAATTAGCAATACAGATTACTGAGAAAATCAAG
CGCCCAGATATGGTGAAAACGGACTTAGCCTTCTTAGGCAAAGACGTATTGTTTGATTTAGATGATGAAGAATAA

Upstream 100 bases:

>100_bases
CAAGCGACACGTGATATCCAAGATGCCTTTACTAAAATTACAGCTAAGCCTGTAGTTGAAAAAGTATTATTTACCGACTT
TGTAATGCAATAGGTTTAAT

Downstream 100 bases:

>100_bases
GAAACAGAGAAGGTAGTGGATCATGGATTCAAATGAACAACAAATGGCTGACGAATGGGCAGCAGCATTAAGTGAAAGTG
CAGAAGCTCAAGCAGTAACC

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTDLLSQDEIDALLHGVDDVEDDVVGNDDNVGSMKSFDFSSQDRIVRGRMPTLELINERFARHMRISLFNMLRKTAEVSI
NGVSMVKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEARLVFILVENFFGGDGRFHAKIEGREFTPTERRIIQLLLKVI
FEDYKEAWSPVMGVEFEYLDSEVNPTMANIVSPTEVIVVSSFHIEVDGGGGDFHVVFPYSMVEPIRELLDAGVQSDKMDT
DVRWSKALRDEIMDVPVEMKVNLLESQISLRDLMELEAGDIIPVEMPEAATVFVEDLPTYRGKVGQSNDKLAIQITEKIK
RPDMVKTDLAFLGKDVLFDLDDEE

Sequences:

>Translated_344_residues
MTDLLSQDEIDALLHGVDDVEDDVVGNDDNVGSMKSFDFSSQDRIVRGRMPTLELINERFARHMRISLFNMLRKTAEVSI
NGVSMVKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEARLVFILVENFFGGDGRFHAKIEGREFTPTERRIIQLLLKVI
FEDYKEAWSPVMGVEFEYLDSEVNPTMANIVSPTEVIVVSSFHIEVDGGGGDFHVVFPYSMVEPIRELLDAGVQSDKMDT
DVRWSKALRDEIMDVPVEMKVNLLESQISLRDLMELEAGDIIPVEMPEAATVFVEDLPTYRGKVGQSNDKLAIQITEKIK
RPDMVKTDLAFLGKDVLFDLDDEE
>Mature_343_residues
TDLLSQDEIDALLHGVDDVEDDVVGNDDNVGSMKSFDFSSQDRIVRGRMPTLELINERFARHMRISLFNMLRKTAEVSIN
GVSMVKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEARLVFILVENFFGGDGRFHAKIEGREFTPTERRIIQLLLKVIF
EDYKEAWSPVMGVEFEYLDSEVNPTMANIVSPTEVIVVSSFHIEVDGGGGDFHVVFPYSMVEPIRELLDAGVQSDKMDTD
VRWSKALRDEIMDVPVEMKVNLLESQISLRDLMELEAGDIIPVEMPEAATVFVEDLPTYRGKVGQSNDKLAIQITEKIKR
PDMVKTDLAFLGKDVLFDLDDEE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=318, Percent_Identity=37.7358490566038, Blast_Score=254, Evalue=8e-69,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 38985; Mature: 38854

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLLSQDEIDALLHGVDDVEDDVVGNDDNVGSMKSFDFSSQDRIVRGRMPTLELINERF
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHH
ARHMRISLFNMLRKTAEVSINGVSMVKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEAR
HHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCEEEECCCCCEEEEECCCCCEEEEEEEE
LVFILVENFFGGDGRFHAKIEGREFTPTERRIIQLLLKVIFEDYKEAWSPVMGVEFEYLD
EEEEEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC
SEVNPTMANIVSPTEVIVVSSFHIEVDGGGGDFHVVFPYSMVEPIRELLDAGVQSDKMDT
CCCCCHHHHHCCCCEEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCC
DVRWSKALRDEIMDVPVEMKVNLLESQISLRDLMELEAGDIIPVEMPEAATVFVEDLPTY
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHCCCC
RGKVGQSNDKLAIQITEKIKRPDMVKTDLAFLGKDVLFDLDDEE
CCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHCCHHEEECCCCC
>Mature Secondary Structure 
TDLLSQDEIDALLHGVDDVEDDVVGNDDNVGSMKSFDFSSQDRIVRGRMPTLELINERF
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHH
ARHMRISLFNMLRKTAEVSINGVSMVKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEAR
HHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCEEEECCCCCEEEEECCCCCEEEEEEEE
LVFILVENFFGGDGRFHAKIEGREFTPTERRIIQLLLKVIFEDYKEAWSPVMGVEFEYLD
EEEEEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC
SEVNPTMANIVSPTEVIVVSSFHIEVDGGGGDFHVVFPYSMVEPIRELLDAGVQSDKMDT
CCCCCHHHHHCCCCEEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCC
DVRWSKALRDEIMDVPVEMKVNLLESQISLRDLMELEAGDIIPVEMPEAATVFVEDLPTY
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHCCCC
RGKVGQSNDKLAIQITEKIKRPDMVKTDLAFLGKDVLFDLDDEE
CCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHCCHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]