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The map label for this gene is yfcM [H]

Identifier: 59712409

GI number: 59712409

Start: 2033761

End: 2034291

Strand: Reverse

Name: yfcM [H]

Synonym: VF_1802

Alternate gene names: 59712409

Gene position: 2034291-2033761 (Counterclockwise)

Preceding gene: 59712412

Following gene: 59712408

Centisome position: 70.21

GC content: 36.35

Gene sequence:

>531_bases
ATGTCGCACCAATACCAAGATTTAATCTCTATTTTTAATAATACCTTTTATGATTCTTTCAATACTAAGCTAGAGCTTGG
TGGTGATGAACCTATCTATTTACCTGCAGGTGATGAATTTACTTATCATCGTATTATTTTTGCTCGTGGTTTCTATCAAT
CAGGTATGCATGAAATAGCACATTGGTGTGTTGCTGGACCTGAACGTCGATTATTGGAAGATTTCGGTTACTGGTACGAG
CCTGATGGACGTACAGAGCAAGTGCAAGCTGAGTTTGAAAAAGTTGAAATTCGACCACAAGCGTATGAATGGATTTTGTC
ATTAAGCGCAGGATTAAAATTTAACGTTAGCTGCGATAACTTGAATGGCGATTTTGAGCCAGATCGTTTAGCATTCATGA
CAAAAGTACATAATGAAGTAATGACAATTTTAGATAGTGGATTACCACCACGAGTTGATATGCTATCTAATGCATTGCGT
GAGTTTTATCAAATAGCCCCATTAACTAAAGAACAATTTATTGTCCAATAG

Upstream 100 bases:

>100_bases
AATAATTTTGAAAAAGAAGATAAAAAAAATTTATCTACATATGTCTTTTAATATTCATGCGGTAGAATGTCGTTCAATTT
ATAATTTTTAAGCTCGTGGC

Downstream 100 bases:

>100_bases
GAAAAAGATGATCATTGAATTTGAAGAAAAAATGCTTGAATTAATTGATGCTCGAATTGAATCGGCATCTGATGATGAGT
TATTTGCCGGCGGCTACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSHQYQDLISIFNNTFYDSFNTKLELGGDEPIYLPAGDEFTYHRIIFARGFYQSGMHEIAHWCVAGPERRLLEDFGYWYE
PDGRTEQVQAEFEKVEIRPQAYEWILSLSAGLKFNVSCDNLNGDFEPDRLAFMTKVHNEVMTILDSGLPPRVDMLSNALR
EFYQIAPLTKEQFIVQ

Sequences:

>Translated_176_residues
MSHQYQDLISIFNNTFYDSFNTKLELGGDEPIYLPAGDEFTYHRIIFARGFYQSGMHEIAHWCVAGPERRLLEDFGYWYE
PDGRTEQVQAEFEKVEIRPQAYEWILSLSAGLKFNVSCDNLNGDFEPDRLAFMTKVHNEVMTILDSGLPPRVDMLSNALR
EFYQIAPLTKEQFIVQ
>Mature_175_residues
SHQYQDLISIFNNTFYDSFNTKLELGGDEPIYLPAGDEFTYHRIIFARGFYQSGMHEIAHWCVAGPERRLLEDFGYWYEP
DGRTEQVQAEFEKVEIRPQAYEWILSLSAGLKFNVSCDNLNGDFEPDRLAFMTKVHNEVMTILDSGLPPRVDMLSNALRE
FYQIAPLTKEQFIVQ

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1563 [H]

Homologues:

Organism=Escherichia coli, GI1788666, Length=172, Percent_Identity=56.3953488372093, Blast_Score=214, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007411 [H]

Pfam domain/function: PF04315 DUF462 [H]

EC number: NA

Molecular weight: Translated: 20503; Mature: 20372

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHQYQDLISIFNNTFYDSFNTKLELGGDEPIYLPAGDEFTYHRIIFARGFYQSGMHEIA
CCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
HWCVAGPERRLLEDFGYWYEPDGRTEQVQAEFEKVEIRPQAYEWILSLSAGLKFNVSCDN
HHHHCCCHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECC
LNGDFEPDRLAFMTKVHNEVMTILDSGLPPRVDMLSNALREFYQIAPLTKEQFIVQ
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHEECC
>Mature Secondary Structure 
SHQYQDLISIFNNTFYDSFNTKLELGGDEPIYLPAGDEFTYHRIIFARGFYQSGMHEIA
CCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
HWCVAGPERRLLEDFGYWYEPDGRTEQVQAEFEKVEIRPQAYEWILSLSAGLKFNVSCDN
HHHHCCCHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECC
LNGDFEPDRLAFMTKVHNEVMTILDSGLPPRVDMLSNALREFYQIAPLTKEQFIVQ
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]