| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is ate [H]
Identifier: 59712370
GI number: 59712370
Start: 1989687
End: 1990379
Strand: Direct
Name: ate [H]
Synonym: VF_1763
Alternate gene names: 59712370
Gene position: 1989687-1990379 (Clockwise)
Preceding gene: 59712369
Following gene: 59712371
Centisome position: 68.67
GC content: 36.08
Gene sequence:
>693_bases ATGAGTCAGTATTCACTTCAAGTTGGTTTAACACCCGAAGGGCCTTGTAGCTACCTACCTAAACAAAAAGAAAGACTCGC TGTTGTAATGGAACAAGAATTACACACAGCACTAGGCTATCAAGCATTAATTCGCCTCGGCTTTCGTCGTAGTGGTGAGA CGATTTATAAACCGATGTGTGAGCATTGTGATGCTTGTAAACCATTAAGAATTAACGCAAATCAATTTAAACCTAGTAAA AGTCAAAAAAGATTATTAAATAAACTCTCCTCTTTTAGGTGGGAACTAAAATCAGAAATGGATGGAAATTGGTTCGATTT GTATGAGCGTTACATCAATACTCGCCATAAGACTGGAAGCATGTATCCTGCAAATCAAAAACAATTTTTTGAATTTTCAC ACAGTCACTGGTTAACGAATCAATTTTTACATATTTATGAAAACGAAACTCTAATAGCCATTGCCGTTAGTGATGTTCTA TCTGACTCTATCAGTGCTATGTATACATTTTTTGAACCAGAACACCCTTTATCTCTAGGAACGATCTCCGTTCTCATTCA GCTAAAATTATGCAAAGAGTTATCTAAAGAGTGGCTTTATCCTGGTTATCAAATAGACGATTGCCCAGCAATGAAGTATA AAGATCAATATAAACCGAACCAAAAGCTAGTAAATATGGTCTGGCAGGGTTAA
Upstream 100 bases:
>100_bases TGAAACGCTGTGATTTCAAAACATTACTTGAAGAACTCAGCACTAAATCAACAATAGCAAACTGTTACTTACCTCAAATA TTAGGGGATAATTCACTTTC
Downstream 100 bases:
>100_bases AATGCAGCCCAAACTTTACATACATCATTTTTAAGGGCATTATTAGCCGCTTAAAAATCAGCCAAAGCTATCTATATAAA GAGGATTCAATGGCAAAAGA
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSQYSLQVGLTPEGPCSYLPKQKERLAVVMEQELHTALGYQALIRLGFRRSGETIYKPMCEHCDACKPLRINANQFKPSK SQKRLLNKLSSFRWELKSEMDGNWFDLYERYINTRHKTGSMYPANQKQFFEFSHSHWLTNQFLHIYENETLIAIAVSDVL SDSISAMYTFFEPEHPLSLGTISVLIQLKLCKELSKEWLYPGYQIDDCPAMKYKDQYKPNQKLVNMVWQG
Sequences:
>Translated_230_residues MSQYSLQVGLTPEGPCSYLPKQKERLAVVMEQELHTALGYQALIRLGFRRSGETIYKPMCEHCDACKPLRINANQFKPSK SQKRLLNKLSSFRWELKSEMDGNWFDLYERYINTRHKTGSMYPANQKQFFEFSHSHWLTNQFLHIYENETLIAIAVSDVL SDSISAMYTFFEPEHPLSLGTISVLIQLKLCKELSKEWLYPGYQIDDCPAMKYKDQYKPNQKLVNMVWQG >Mature_229_residues SQYSLQVGLTPEGPCSYLPKQKERLAVVMEQELHTALGYQALIRLGFRRSGETIYKPMCEHCDACKPLRINANQFKPSKS QKRLLNKLSSFRWELKSEMDGNWFDLYERYINTRHKTGSMYPANQKQFFEFSHSHWLTNQFLHIYENETLIAIAVSDVLS DSISAMYTFFEPEHPLSLGTISVLIQLKLCKELSKEWLYPGYQIDDCPAMKYKDQYKPNQKLVNMVWQG
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 26924; Mature: 26793
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQYSLQVGLTPEGPCSYLPKQKERLAVVMEQELHTALGYQALIRLGFRRSGETIYKPMC CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH EHCDACKPLRINANQFKPSKSQKRLLNKLSSFRWELKSEMDGNWFDLYERYINTRHKTGS HHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC MYPANQKQFFEFSHSHWLTNQFLHIYENETLIAIAVSDVLSDSISAMYTFFEPEHPLSLG CCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHH TISVLIQLKLCKELSKEWLYPGYQIDDCPAMKYKDQYKPNQKLVNMVWQG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure SQYSLQVGLTPEGPCSYLPKQKERLAVVMEQELHTALGYQALIRLGFRRSGETIYKPMC CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH EHCDACKPLRINANQFKPSKSQKRLLNKLSSFRWELKSEMDGNWFDLYERYINTRHKTGS HHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC MYPANQKQFFEFSHSHWLTNQFLHIYENETLIAIAVSDVLSDSISAMYTFFEPEHPLSLG CCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHH TISVLIQLKLCKELSKEWLYPGYQIDDCPAMKYKDQYKPNQKLVNMVWQG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA