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The map label for this gene is ybaR [H]

Identifier: 59712356

GI number: 59712356

Start: 1973374

End: 1974921

Strand: Direct

Name: ybaR [H]

Synonym: VF_1749

Alternate gene names: 59712356

Gene position: 1973374-1974921 (Clockwise)

Preceding gene: 59712355

Following gene: 59712357

Centisome position: 68.11

GC content: 40.57

Gene sequence:

>1548_bases
ATGTTTGAATTTCCAAAATTTTCTAATCATTCTGTAAAGAATGATGTCTTATCAGGTCTAACCGTTGCGCTAGCCTTGGT
ACCTGAAGCTGTAGCTTTTGCCTTTGTTGCAGGTGTTGACCCAATGGTAGGCTTATATGCTGCCTTCATCGTAGGTTTAA
TTACTTCTCTTATTGGTGGCCGTCCAGGTATGATCTCTGGTGCAACGGGTGCTATGGCTGTAGTAATGGTTAGCTTAGTT
TCTGTTCACGGCGTTCAATACCTTTTTGCTGCCATTATGCTCGCCGGTATTCTTCAAATTTCAGCTGGTTTATTTAAGCT
TGGTAAATTCATTCGTATCGTGCCACACCCTGTAATGATCGGATTTGTAAACGGCCTTGCTATTGTTATCTTCCTTGCTC
AACTTGGTCAATTTAAAGCGCCCGATGCATTAGGTAACCTGGATTGGCTTCAAGGCGATCAAATGATGTTAATGCTTGGC
CTTGTTGCTGTAACTATGGCTATCATTCATTTCTTACCAAAGTTAACAACTGCAGTTCCATCGTCATTGGTTGCTATTAT
TGTTGTTACAGGCTTAGTGCAAGGTTTAGATTTAGACACTCGTACTGTAGTAGATTTTCTACGTACAATGAGTGGTAATG
ATTCAGCAACACTAGCAGGTTCTTTACCAACATTTGCATTACCGGTTGTTCCTCTGTCATTAGAAACACTTTACATCATC
TTCCCATATGCGCTTATCTTAGCGGCAATAGGTCTTATCGAATCCCTTCTAACATTAACGGTAATTGATGAGATGACAGG
TACTCGTGGTCAATCAAATCGTGAGTGTGTTGGTCAAGGTGTTGCAAACGTAACATGTTCTGTATTTGGCGCTATGGGCG
GCTGTGCAATGATTGGTCAATCAATGATTAACGTAAACTCTGGTGGTCGTGGTCGTTTATCTGGCATCGTAGCTGCTGTA
ATGCTGTTAGTCTTCATCCTATTTGCTTCTTCACTAATTGAGATGATCCCTCTAGCTGCTCTTGTTGGTGTTATGTTCAT
GGTAGTTATTGGTACATTTGAATGGGCAACATTCAAACTTGCACGCCGAGTACCAAAACAAGACTTCTTCGTGATTGTAC
TTGTAACCGTTGTTACTGTGTTTACTGACCTTGCTGTAGCAGTAGCTGTTGGTGTTATTGCATCAGCACTTATGTTTGCA
TGGCAACACGCTAAACACATCTTCTCTACAAACTCTGTAAACGAAGAAGGTTCTAAAGTTTATGAGATTAATGGTCCAAT
TTTCTTTGGTTCAGCAGCAAACTTCTTAGAGTTATTCGACGTTGAAAATGATCCTCAAGACATCATTATTGACTTCGCAG
CATCACGTGTTGTTGACCATTCAGCTATTGAAGCCGTTGATACTATCGCTGAGCGTTATTCTAAGGCAGGTAAAAAAGTA
CATCTTCGTCACTTAAGCCAAGATTGCCATGCTCTTCTAAATAAAGCAGGTAGCTTAGTTGAAATCAATGTACAAGAAGA
CCCTATCTATAAAGTTGTGAGCCAATAA

Upstream 100 bases:

>100_bases
TATATCTAATTCCGAATAAACATTGAAGTTCATCACGCTTTTCTGTACGATTCGCCGCACACTATGCTTGAAAAACAACC
AAAGAAGATATCTAAAAAAC

Downstream 100 bases:

>100_bases
ATAGGCACATAGCTCAAATTCATTGATAGACTTTAAAAATCCCGATATGGTTCTCCTGTCGGGATTTTTTATATTCACCT
TTCTTTTAATGGAATAAAAC

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MFEFPKFSNHSVKNDVLSGLTVALALVPEAVAFAFVAGVDPMVGLYAAFIVGLITSLIGGRPGMISGATGAMAVVMVSLV
SVHGVQYLFAAIMLAGILQISAGLFKLGKFIRIVPHPVMIGFVNGLAIVIFLAQLGQFKAPDALGNLDWLQGDQMMLMLG
LVAVTMAIIHFLPKLTTAVPSSLVAIIVVTGLVQGLDLDTRTVVDFLRTMSGNDSATLAGSLPTFALPVVPLSLETLYII
FPYALILAAIGLIESLLTLTVIDEMTGTRGQSNRECVGQGVANVTCSVFGAMGGCAMIGQSMINVNSGGRGRLSGIVAAV
MLLVFILFASSLIEMIPLAALVGVMFMVVIGTFEWATFKLARRVPKQDFFVIVLVTVVTVFTDLAVAVAVGVIASALMFA
WQHAKHIFSTNSVNEEGSKVYEINGPIFFGSAANFLELFDVENDPQDIIIDFAASRVVDHSAIEAVDTIAERYSKAGKKV
HLRHLSQDCHALLNKAGSLVEINVQEDPIYKVVSQ

Sequences:

>Translated_515_residues
MFEFPKFSNHSVKNDVLSGLTVALALVPEAVAFAFVAGVDPMVGLYAAFIVGLITSLIGGRPGMISGATGAMAVVMVSLV
SVHGVQYLFAAIMLAGILQISAGLFKLGKFIRIVPHPVMIGFVNGLAIVIFLAQLGQFKAPDALGNLDWLQGDQMMLMLG
LVAVTMAIIHFLPKLTTAVPSSLVAIIVVTGLVQGLDLDTRTVVDFLRTMSGNDSATLAGSLPTFALPVVPLSLETLYII
FPYALILAAIGLIESLLTLTVIDEMTGTRGQSNRECVGQGVANVTCSVFGAMGGCAMIGQSMINVNSGGRGRLSGIVAAV
MLLVFILFASSLIEMIPLAALVGVMFMVVIGTFEWATFKLARRVPKQDFFVIVLVTVVTVFTDLAVAVAVGVIASALMFA
WQHAKHIFSTNSVNEEGSKVYEINGPIFFGSAANFLELFDVENDPQDIIIDFAASRVVDHSAIEAVDTIAERYSKAGKKV
HLRHLSQDCHALLNKAGSLVEINVQEDPIYKVVSQ
>Mature_515_residues
MFEFPKFSNHSVKNDVLSGLTVALALVPEAVAFAFVAGVDPMVGLYAAFIVGLITSLIGGRPGMISGATGAMAVVMVSLV
SVHGVQYLFAAIMLAGILQISAGLFKLGKFIRIVPHPVMIGFVNGLAIVIFLAQLGQFKAPDALGNLDWLQGDQMMLMLG
LVAVTMAIIHFLPKLTTAVPSSLVAIIVVTGLVQGLDLDTRTVVDFLRTMSGNDSATLAGSLPTFALPVVPLSLETLYII
FPYALILAAIGLIESLLTLTVIDEMTGTRGQSNRECVGQGVANVTCSVFGAMGGCAMIGQSMINVNSGGRGRLSGIVAAV
MLLVFILFASSLIEMIPLAALVGVMFMVVIGTFEWATFKLARRVPKQDFFVIVLVTVVTVFTDLAVAVAVGVIASALMFA
WQHAKHIFSTNSVNEEGSKVYEINGPIFFGSAANFLELFDVENDPQDIIIDFAASRVVDHSAIEAVDTIAERYSKAGKKV
HLRHLSQDCHALLNKAGSLVEINVQEDPIYKVVSQ

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI45827800, Length=488, Percent_Identity=21.5163934426229, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI39752683, Length=488, Percent_Identity=21.5163934426229, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI45827802, Length=461, Percent_Identity=21.6919739696312, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI269784651, Length=583, Percent_Identity=20.7547169811321, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI94721259, Length=425, Percent_Identity=19.7647058823529, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI94721253, Length=425, Percent_Identity=19.7647058823529, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI94721255, Length=425, Percent_Identity=19.7647058823529, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI94721257, Length=425, Percent_Identity=19.7647058823529, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI4557535, Length=495, Percent_Identity=20.4040404040404, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI47131207, Length=503, Percent_Identity=21.0735586481113, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI20336272, Length=503, Percent_Identity=21.0735586481113, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI87081859, Length=500, Percent_Identity=28.2, Blast_Score=164, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI86565215, Length=527, Percent_Identity=21.8216318785579, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17551690, Length=482, Percent_Identity=21.1618257261411, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17566848, Length=568, Percent_Identity=22.0070422535211, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6325260, Length=439, Percent_Identity=21.8678815489749, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21355087, Length=410, Percent_Identity=23.9024390243902, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24647160, Length=410, Percent_Identity=23.9024390243902, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI85815873, Length=462, Percent_Identity=25.7575757575758, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24649801, Length=535, Percent_Identity=21.4953271028037, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI19922482, Length=543, Percent_Identity=21.5469613259669, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24651449, Length=444, Percent_Identity=23.4234234234234, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21358229, Length=379, Percent_Identity=23.4828496042216, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24663084, Length=135, Percent_Identity=27.4074074074074, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21357695, Length=135, Percent_Identity=27.4074074074074, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21358633, Length=131, Percent_Identity=31.2977099236641, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 54693; Mature: 54693

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCC
>Mature Secondary Structure
MFEFPKFSNHSVKNDVLSGLTVALALVPEAVAFAFVAGVDPMVGLYAAFIVGLITSLIGG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
RPGMISGATGAMAVVMVSLVSVHGVQYLFAAIMLAGILQISAGLFKLGKFIRIVPHPVMI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GFVNGLAIVIFLAQLGQFKAPDALGNLDWLQGDQMMLMLGLVAVTMAIIHFLPKLTTAVP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLVAIIVVTGLVQGLDLDTRTVVDFLRTMSGNDSATLAGSLPTFALPVVPLSLETLYII
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHCCHHHHHHHHH
FPYALILAAIGLIESLLTLTVIDEMTGTRGQSNRECVGQGVANVTCSVFGAMGGCAMIGQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
SMINVNSGGRGRLSGIVAAVMLLVFILFASSLIEMIPLAALVGVMFMVVIGTFEWATFKL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ARRVPKQDFFVIVLVTVVTVFTDLAVAVAVGVIASALMFAWQHAKHIFSTNSVNEEGSKV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
YEINGPIFFGSAANFLELFDVENDPQDIIIDFAASRVVDHSAIEAVDTIAERYSKAGKKV
EEECCCEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
HLRHLSQDCHALLNKAGSLVEINVQEDPIYKVVSQ
HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]