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The map label for this gene is ycgL [C]

Identifier: 59712310

GI number: 59712310

Start: 1920672

End: 1920932

Strand: Reverse

Name: ycgL [C]

Synonym: VF_1703

Alternate gene names: 59712310

Gene position: 1920932-1920672 (Counterclockwise)

Preceding gene: 59712314

Following gene: 59712309

Centisome position: 66.3

GC content: 34.1

Gene sequence:

>261_bases
ATGTTTTGTTCTATTTATAAAAGTACGAAAAAACAAGGTGCTTATCTTTATATTGAGAAAAAAGATGATTTTGCTCCTGT
ACCGCAAGAACTCATGGCGATGTTCGGTACACCAACCATGGTAATGGTGGTAAATTTAGAAGGCAGAAAACTGGCTTCAG
TTGATGTAGAAAAAGTAAAAGCAGCAATAAAAGAAAATGGATTCTTTTTGCAGTTACCACCACCACCTGAAAACCTGCTT
GAAAAATACAAAAAAAGATAA

Upstream 100 bases:

>100_bases
GTCAGAAGTCTACTTTTTAGCAAGCCTCTCACCAAATAGACATTAATCATTTGAAATAAGTTGAGAGCAAGAGCAACCCT
TTCAAAAAATAGGTTATAAA

Downstream 100 bases:

>100_bases
AGCAGCAAGAGAAGAGAATTAATTATATGAAGAAAAAATTACTGCTAGGGATAGTCAGTTTATTTTTGGCAACATCAGCA
TCAGCATCAGCAACACCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MFCSIYKSTKKQGAYLYIEKKDDFAPVPQELMAMFGTPTMVMVVNLEGRKLASVDVEKVKAAIKENGFFLQLPPPPENLL
EKYKKR

Sequences:

>Translated_86_residues
MFCSIYKSTKKQGAYLYIEKKDDFAPVPQELMAMFGTPTMVMVVNLEGRKLASVDVEKVKAAIKENGFFLQLPPPPENLL
EKYKKR
>Mature_86_residues
MFCSIYKSTKKQGAYLYIEKKDDFAPVPQELMAMFGTPTMVMVVNLEGRKLASVDVEKVKAAIKENGFFLQLPPPPENLL
EKYKKR

Specific function: Unknown

COG id: COG3100

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0745 family [H]

Homologues:

Organism=Escherichia coli, GI308199518, Length=84, Percent_Identity=57.1428571428571, Blast_Score=108, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007840
- ProDom:   PD030374 [H]

Pfam domain/function: PF05166 YcgL [H]

EC number: NA

Molecular weight: Translated: 9830; Mature: 9830

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFCSIYKSTKKQGAYLYIEKKDDFAPVPQELMAMFGTPTMVMVVNLEGRKLASVDVEKVK
CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCEEEEEEECCCCEEECCCHHHHH
AAIKENGFFLQLPPPPENLLEKYKKR
HHHHCCCEEEECCCCCHHHHHHHHCC
>Mature Secondary Structure
MFCSIYKSTKKQGAYLYIEKKDDFAPVPQELMAMFGTPTMVMVVNLEGRKLASVDVEKVK
CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCEEEEEEECCCCEEECCCHHHHH
AAIKENGFFLQLPPPPENLLEKYKKR
HHHHCCCEEEECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA