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The map label for this gene is 59712283

Identifier: 59712283

GI number: 59712283

Start: 1887319

End: 1887882

Strand: Direct

Name: 59712283

Synonym: VF_1676

Alternate gene names: NA

Gene position: 1887319-1887882 (Clockwise)

Preceding gene: 172087718

Following gene: 59712285

Centisome position: 65.14

GC content: 37.77

Gene sequence:

>564_bases
ATGTCTGTCAAGGAGAAAAAAAGAGGAAGACCTAGTGGTTCGAATAAACAATTAAGCCAAAAATCCATAATGATAATGGC
AAAAGAATTAATGAAATCAGAAGGAAAAATCCCAAGTATTCGCAAACTGGCTACGCATCTAAATGTTGATGCAATGGCTA
TCTACTATTACTTCAGCAATAAAAACGCGCTACTTGAAGCCATCACAGTGTCATTAATTGAAGAGATACATCAACCAAAA
GAACAAACTGACTGGCAAGATGAATTACATCTGTTATGTGTAAGTTACCTACGCTTACTCAATACGTATACAGGACTGCT
TGAGACACTGCTGTCGATGACATCGCAAGGGCCTGCTGATATTTTTACCGAACGTTTTAGCATGATCATTGAGCCACTTG
AACTCGATAATACAGCGAAAAAAAACGCCTTGGATCTATTAGCAGATTACCTACATGGGTTTGCTCTCGCTTTACACTGT
AACCCATCGCACGAATTAGATATTTCCGAATACATCAAAGGACCGCTTAATTTTTATTGTCTTGCCCTTAAATATTCACA
CTAA

Upstream 100 bases:

>100_bases
GATTCTGATTCGTTAATAGTCTTTACTTGGCTTTGATCATTTCTTTCTATATAATTATTCTACACTGTAGAAATTAATAT
TAGTTTAGCGAGGAATTTAA

Downstream 100 bases:

>100_bases
GCCAAACAGCCCTTAGGCGTCACATTAAAATGGCGCTTAAACTCACGGCTAAATTGAGAAGTGCTGGTATATCCAACTAA
ATGAGCAGCGTCATTCACTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSVKEKKRGRPSGSNKQLSQKSIMIMAKELMKSEGKIPSIRKLATHLNVDAMAIYYYFSNKNALLEAITVSLIEEIHQPK
EQTDWQDELHLLCVSYLRLLNTYTGLLETLLSMTSQGPADIFTERFSMIIEPLELDNTAKKNALDLLADYLHGFALALHC
NPSHELDISEYIKGPLNFYCLALKYSH

Sequences:

>Translated_187_residues
MSVKEKKRGRPSGSNKQLSQKSIMIMAKELMKSEGKIPSIRKLATHLNVDAMAIYYYFSNKNALLEAITVSLIEEIHQPK
EQTDWQDELHLLCVSYLRLLNTYTGLLETLLSMTSQGPADIFTERFSMIIEPLELDNTAKKNALDLLADYLHGFALALHC
NPSHELDISEYIKGPLNFYCLALKYSH
>Mature_186_residues
SVKEKKRGRPSGSNKQLSQKSIMIMAKELMKSEGKIPSIRKLATHLNVDAMAIYYYFSNKNALLEAITVSLIEEIHQPKE
QTDWQDELHLLCVSYLRLLNTYTGLLETLLSMTSQGPADIFTERFSMIIEPLELDNTAKKNALDLLADYLHGFALALHCN
PSHELDISEYIKGPLNFYCLALKYSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21280; Mature: 21149

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKEKKRGRPSGSNKQLSQKSIMIMAKELMKSEGKIPSIRKLATHLNVDAMAIYYYFSN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEECC
KNALLEAITVSLIEEIHQPKEQTDWQDELHLLCVSYLRLLNTYTGLLETLLSMTSQGPAD
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IFTERFSMIIEPLELDNTAKKNALDLLADYLHGFALALHCNPSHELDISEYIKGPLNFYC
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHCCCHHEEE
LALKYSH
EEEEECC
>Mature Secondary Structure 
SVKEKKRGRPSGSNKQLSQKSIMIMAKELMKSEGKIPSIRKLATHLNVDAMAIYYYFSN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEECC
KNALLEAITVSLIEEIHQPKEQTDWQDELHLLCVSYLRLLNTYTGLLETLLSMTSQGPAD
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IFTERFSMIIEPLELDNTAKKNALDLLADYLHGFALALHCNPSHELDISEYIKGPLNFYC
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHCCCHHEEE
LALKYSH
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA