| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712270
Identifier: 59712270
GI number: 59712270
Start: 1872161
End: 1873054
Strand: Reverse
Name: 59712270
Synonym: VF_1663
Alternate gene names: NA
Gene position: 1873054-1872161 (Counterclockwise)
Preceding gene: 59712273
Following gene: 59712269
Centisome position: 64.64
GC content: 43.51
Gene sequence:
>894_bases ATGAAACGTCTTTTATCTATTGTTGCCCTTATGTTTGTTTTTGTGGTTTCAGCACCACATGCAGAAGCAAAGAAATTCGG TGGCGGTAAGTCATTTGGTAAAAGCTTTAAAACGGCGCCTGCGCCAAAACAAAAACAGCAAAATACCAATACTATTGGTA AGCAAGACACAACAAAAAGTGCATCAGGCAAAAAAGGCCTAATGGGCGGCTTGCTTGGTGGTCTACTTGCTGGTGGTTTA TTAGCAGCTCTATTTAGTGGTGGTGCGTTTGAAGGTATCCAATTCATGGATATTCTTATCATGGCAGGTATCGCATTCAT TCTATTCAAGGTATTCCGCTCAATGATGGCTGCCAAGGCGGGTAGCATGAATCAGAGACAAGGTGCAGCTTATGCAGGCC CACAAGGTCAGCAGGATGCACAGCCTAGTTTCCGTGATAATCAACAATACTTCCAAGCTGATCAAGCTACAGCACAACCT ACTGGTGGTTTTGGTGCAGCAAGTGCTGATGACGTTCCGCATAACTACCCACCGGGTTTTGATATGCAAGCATTCATCAA TGGTTCTCGTGAACACTACCGTATTTTACAAGGTGCATGGAACCATAACCAACTTGAGACGATTCAAGAGTATGTTTCAA TCAGTCTGTACAATGATCTTGTACAAGAGCGTGCAACCCTTGAAGGCGAGCAACACACAGACGTAATGTATGTGGATGCA GAAGTGGTTCGTGCTGATTATGATGCAAACCGTGCTCAATTAAGTCTTCAGTTCTCTGGTCGCTACCGTGATGCTGTAGA AGGTATTGAAGAAGACATTACTGATATTTGGCACCTTGAGCGTGATTTAACACAACCAAATGCGCCATGGTTAATTATCG GTATTCAAGCTTAA
Upstream 100 bases:
>100_bases TTTAACACTCTGAAACATTCTATTGAAGATTAATGCTGCCATTGTTCCTCAATGCAAGCTATTATCAATCCAAATTAATT CCAAAAATAAGGAAGAGGTA
Downstream 100 bases:
>100_bases GTACTTAACTAGCTGAAAATTGATTAAAAAATATCCCTATAGTGAGTAATCCTATAGGGATTTTTTATAGGTGTGATCCA GCTCTGTTTTAATATTTTTC
Product: Tim44-like domain-contain protein
Products: NA
Alternate protein names: Tim44-Like Domain-Contain Protein
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKRLLSIVALMFVFVVSAPHAEAKKFGGGKSFGKSFKTAPAPKQKQQNTNTIGKQDTTKSASGKKGLMGGLLGGLLAGGL LAALFSGGAFEGIQFMDILIMAGIAFILFKVFRSMMAAKAGSMNQRQGAAYAGPQGQQDAQPSFRDNQQYFQADQATAQP TGGFGAASADDVPHNYPPGFDMQAFINGSREHYRILQGAWNHNQLETIQEYVSISLYNDLVQERATLEGEQHTDVMYVDA EVVRADYDANRAQLSLQFSGRYRDAVEGIEEDITDIWHLERDLTQPNAPWLIIGIQA
Sequences:
>Translated_297_residues MKRLLSIVALMFVFVVSAPHAEAKKFGGGKSFGKSFKTAPAPKQKQQNTNTIGKQDTTKSASGKKGLMGGLLGGLLAGGL LAALFSGGAFEGIQFMDILIMAGIAFILFKVFRSMMAAKAGSMNQRQGAAYAGPQGQQDAQPSFRDNQQYFQADQATAQP TGGFGAASADDVPHNYPPGFDMQAFINGSREHYRILQGAWNHNQLETIQEYVSISLYNDLVQERATLEGEQHTDVMYVDA EVVRADYDANRAQLSLQFSGRYRDAVEGIEEDITDIWHLERDLTQPNAPWLIIGIQA >Mature_297_residues MKRLLSIVALMFVFVVSAPHAEAKKFGGGKSFGKSFKTAPAPKQKQQNTNTIGKQDTTKSASGKKGLMGGLLGGLLAGGL LAALFSGGAFEGIQFMDILIMAGIAFILFKVFRSMMAAKAGSMNQRQGAAYAGPQGQQDAQPSFRDNQQYFQADQATAQP TGGFGAASADDVPHNYPPGFDMQAFINGSREHYRILQGAWNHNQLETIQEYVSISLYNDLVQERATLEGEQHTDVMYVDA EVVRADYDANRAQLSLQFSGRYRDAVEGIEEDITDIWHLERDLTQPNAPWLIIGIQA
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32390; Mature: 32390
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLSIVALMFVFVVSAPHAEAKKFGGGKSFGKSFKTAPAPKQKQQNTNTIGKQDTTKS CHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCC ASGKKGLMGGLLGGLLAGGLLAALFSGGAFEGIQFMDILIMAGIAFILFKVFRSMMAAKA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSMNQRQGAAYAGPQGQQDAQPSFRDNQQYFQADQATAQPTGGFGAASADDVPHNYPPGF CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DMQAFINGSREHYRILQGAWNHNQLETIQEYVSISLYNDLVQERATLEGEQHTDVMYVDA CHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECH EVVRADYDANRAQLSLQFSGRYRDAVEGIEEDITDIWHLERDLTQPNAPWLIIGIQA HHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC >Mature Secondary Structure MKRLLSIVALMFVFVVSAPHAEAKKFGGGKSFGKSFKTAPAPKQKQQNTNTIGKQDTTKS CHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCC ASGKKGLMGGLLGGLLAGGLLAALFSGGAFEGIQFMDILIMAGIAFILFKVFRSMMAAKA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSMNQRQGAAYAGPQGQQDAQPSFRDNQQYFQADQATAQPTGGFGAASADDVPHNYPPGF CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DMQAFINGSREHYRILQGAWNHNQLETIQEYVSISLYNDLVQERATLEGEQHTDVMYVDA CHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECH EVVRADYDANRAQLSLQFSGRYRDAVEGIEEDITDIWHLERDLTQPNAPWLIIGIQA HHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA