| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is pgsA [H]
Identifier: 59712232
GI number: 59712232
Start: 1825722
End: 1826276
Strand: Reverse
Name: pgsA [H]
Synonym: VF_1625
Alternate gene names: 59712232
Gene position: 1826276-1825722 (Counterclockwise)
Preceding gene: 59712233
Following gene: 59712229
Centisome position: 63.03
GC content: 40.0
Gene sequence:
>555_bases ATGCGATTAACAATACCAAATATACTCACGTTTATCCGACTAGCACTGATCCCTGTGTTTGTTGTTGTGTTCTACTTGCC TTATGAATGGTCAGCTGTAGCTGCTGCAATGGTATTCTGGGTTGCAGGTTTTACTGATTGGTTAGATGGACTTTTAGCTC GTAAACTGGGGCAAACTTCTCGCTTTGGTGCTTTTTTAGACCCAGTTGCTGATAAAGTCATGGTGGCTGCTGCTTTAATT TTAATTACTGAGCATTATCATACAATTTGGATCACCATCCCTGCGATTACAATGATTGCACGTGAAATTATTATTTCTGC ATTACGAGAGTGGATGGCTGAAATAGGAAAACGAGCAAGTGTTGCCGTATCTTGGGTTGGTAAAGTAAAAACTGTATCTC AAATGTTTGCGCTTTGGGTTCTTATCTGGCGTTACGATGATTGGATGATCTGGTTAGGTTATGCCGCTCTATATATTGCA ACTATTTTGACATATTGGTCGATGGTGCAGTACTTAGCTGCAGCAAAAGATGATCTACTTAATGCAGATGAATAG
Upstream 100 bases:
>100_bases AGGCATTAGCCATTCTTTGGCAGAAAAAATACATGATGCGTTGAAACACGGATAAAAAAAGCGCACCATACACTCGCGGA CCAAAACTTAAGAATTATTT
Downstream 100 bases:
>100_bases ATATAAATGAATTGAAAAGCGAACTTAGGTTCGCTTTTTTTATATTTGAAATATTATTTTGCATAGTCAGCTGATATTAC AGACTTTATCGTTTTGATTT
Product: phosphatidylglycerophosphate synthetase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MRLTIPNILTFIRLALIPVFVVVFYLPYEWSAVAAAMVFWVAGFTDWLDGLLARKLGQTSRFGAFLDPVADKVMVAAALI LITEHYHTIWITIPAITMIAREIIISALREWMAEIGKRASVAVSWVGKVKTVSQMFALWVLIWRYDDWMIWLGYAALYIA TILTYWSMVQYLAAAKDDLLNADE
Sequences:
>Translated_184_residues MRLTIPNILTFIRLALIPVFVVVFYLPYEWSAVAAAMVFWVAGFTDWLDGLLARKLGQTSRFGAFLDPVADKVMVAAALI LITEHYHTIWITIPAITMIAREIIISALREWMAEIGKRASVAVSWVGKVKTVSQMFALWVLIWRYDDWMIWLGYAALYIA TILTYWSMVQYLAAAKDDLLNADE >Mature_184_residues MRLTIPNILTFIRLALIPVFVVVFYLPYEWSAVAAAMVFWVAGFTDWLDGLLARKLGQTSRFGAFLDPVADKVMVAAALI LITEHYHTIWITIPAITMIAREIIISALREWMAEIGKRASVAVSWVGKVKTVSQMFALWVLIWRYDDWMIWLGYAALYIA TILTYWSMVQYLAAAKDDLLNADE
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=181, Percent_Identity=63.5359116022099, Blast_Score=237, Evalue=3e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20981; Mature: 20981
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTIPNILTFIRLALIPVFVVVFYLPYEWSAVAAAMVFWVAGFTDWLDGLLARKLGQTS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RFGAFLDPVADKVMVAAALILITEHYHTIWITIPAITMIAREIIISALREWMAEIGKRAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAVSWVGKVKTVSQMFALWVLIWRYDDWMIWLGYAALYIATILTYWSMVQYLAAAKDDLL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NADE CCCC >Mature Secondary Structure MRLTIPNILTFIRLALIPVFVVVFYLPYEWSAVAAAMVFWVAGFTDWLDGLLARKLGQTS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RFGAFLDPVADKVMVAAALILITEHYHTIWITIPAITMIAREIIISALREWMAEIGKRAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAVSWVGKVKTVSQMFALWVLIWRYDDWMIWLGYAALYIATILTYWSMVQYLAAAKDDLL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NADE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA