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The map label for this gene is 59712231

Identifier: 59712231

GI number: 59712231

Start: 1824229

End: 1824726

Strand: Direct

Name: 59712231

Synonym: VF_1624

Alternate gene names: NA

Gene position: 1824229-1824726 (Clockwise)

Preceding gene: 59712230

Following gene: 59712238

Centisome position: 62.96

GC content: 38.55

Gene sequence:

>498_bases
ATGAAAAGTATATTTATTGCTGCTTTTGTTGGAATTTCAAGCCCTGATCTTATCAAACGCCTAGCGTCCGTTACTCATGA
AGAAGGCGGCAAATGGCTAGTGAGTAAAATCCACTATCTAGATACACATATTTCTGCCGTAATTAAAATTGAAGTCCCTT
CCGAACATAAACAAGCCGTCCAAGATTATTTTTTATCTCAAGATGATCTAATGGTGACCTTTAGTGATGTTATTGATACC
ACAGTTCAAGATACACACAGCAAATTAAAAGTCGACTCTGAAGATAGAGCGGGTATTGTTAACGATATTAGCAATATTCT
TCAAAATGAAGGTATTGAGCTAATCGATATGGACAGCCATCGTATAGGCGTTCCTGCTAGCGGTACAAGCGTATTTACTG
CAACTCTTAGCCTCAAGTTGCCTGCAGCCGCAAACATTAATGATCTTGCTGCTGAAATTGAATCCTTAAGCGAAGACATG
GTCGTCACTGTTATTTAA

Upstream 100 bases:

>100_bases
GATGTTTCTCAATTATTTTTAGCGCAAGACGCCTACACTATTATTAAAGGGAGTTCATATTTGGACTCCTTAATTACCAA
TAATAATTGGAGGCGCCATT

Downstream 100 bases:

>100_bases
TTTACTATATCGCAAACGTAAAAAAGCCCACTCATTCCTGAATGGGCTTTCCAATTTTTGGTATGAGCGGAGCGACACAC
GAGGTTCCCGATCTTCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycine Cleavage System Regulatory Protein-Like Protein; ACT Domain-Containing Protein

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKSIFIAAFVGISSPDLIKRLASVTHEEGGKWLVSKIHYLDTHISAVIKIEVPSEHKQAVQDYFLSQDDLMVTFSDVIDT
TVQDTHSKLKVDSEDRAGIVNDISNILQNEGIELIDMDSHRIGVPASGTSVFTATLSLKLPAAANINDLAAEIESLSEDM
VVTVI

Sequences:

>Translated_165_residues
MKSIFIAAFVGISSPDLIKRLASVTHEEGGKWLVSKIHYLDTHISAVIKIEVPSEHKQAVQDYFLSQDDLMVTFSDVIDT
TVQDTHSKLKVDSEDRAGIVNDISNILQNEGIELIDMDSHRIGVPASGTSVFTATLSLKLPAAANINDLAAEIESLSEDM
VVTVI
>Mature_165_residues
MKSIFIAAFVGISSPDLIKRLASVTHEEGGKWLVSKIHYLDTHISAVIKIEVPSEHKQAVQDYFLSQDDLMVTFSDVIDT
TVQDTHSKLKVDSEDRAGIVNDISNILQNEGIELIDMDSHRIGVPASGTSVFTATLSLKLPAAANINDLAAEIESLSEDM
VVTVI

Specific function: Unknown

COG id: COG2716

COG function: function code E; Glycine cleavage system regulatory protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17963; Mature: 17963

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIFIAAFVGISSPDLIKRLASVTHEEGGKWLVSKIHYLDTHISAVIKIEVPSEHKQAV
CCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEEEECCCHHHHHH
QDYFLSQDDLMVTFSDVIDTTVQDTHSKLKVDSEDRAGIVNDISNILQNEGIELIDMDSH
HHHHCCCCCEEEEHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCEEEECCCC
RIGVPASGTSVFTATLSLKLPAAANINDLAAEIESLSEDMVVTVI
EECCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MKSIFIAAFVGISSPDLIKRLASVTHEEGGKWLVSKIHYLDTHISAVIKIEVPSEHKQAV
CCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEEEECCCHHHHHH
QDYFLSQDDLMVTFSDVIDTTVQDTHSKLKVDSEDRAGIVNDISNILQNEGIELIDMDSH
HHHHCCCCCEEEEHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCEEEECCCC
RIGVPASGTSVFTATLSLKLPAAANINDLAAEIESLSEDMVVTVI
EECCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA