| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is pstC2 [H]
Identifier: 59712218
GI number: 59712218
Start: 1807562
End: 1808488
Strand: Direct
Name: pstC2 [H]
Synonym: VF_1611
Alternate gene names: 59712218
Gene position: 1807562-1808488 (Clockwise)
Preceding gene: 59712217
Following gene: 59712219
Centisome position: 62.38
GC content: 40.99
Gene sequence:
>927_bases ATGACCATCGCAATGAATAATCAAAGCACAGAAAATCAAGTAAAACCATCTAACAATCCACTACGAGAAAAAAAGCGCGT GGATTGGAGAGAACGTATTTTTCACGGTTTATTTTTAAGTTGTGCTGTTATTGGTATTGTTTCACTAGCGACTATCGCTT ACTTCATCATTAAAGAAAGTATCCCAGCATTTCAACAAGCTGGTGTAAGCGGCATTGTATTAGGCCAAGATTGGCTACCG CCGGCATTATATGGTGTATTCACCATGATCGTCGCGTCAATTGTATCTACTTTTGGTGCAGTATTAGTTGGTGTTCCTGT TGGTATTTTAACGGCTATTTTTATTGCAGAAATAGCACCAAAACAAGTCGCTGATATTATTCGACCTGCCGTTGAACTAT TAGCTGGTATACCATCGGTTGTATACGGCTTCTTTGGCCTGGTTATTATTGTTCCATTAATTCAAGACATATTCCAAGTC CCTGCAGGTAACACCATTCTTGCTGGTATTATCGTTCTTGGTGTAATGATTCTTCCTACTGTAATCACCGTATCAGAAAC GTCTATTCGTGCTGTACCGTCAACATACAGAGAAGGTTCATTGGCACTTGGGGCTTCTAAAATATTCACTATTTTCCGTA TTCTTCTTCCTGCCGCTCGTTCAGGTATCATGACAGGCGTTATTCTTGGTATCGCTCGTGCACTGGGTGAAACCATGGCA ATCATCATGGTAATGGGTAACGCCCCAGCAATGCCTGAAGGAATTTTAGATTCAGCACGAACATTAACCGCAAACATCGC AATTGAAATGTCATACGCAAGTGGCATTCACGCCAACGCTCTGTACGCAACTGGTGTGGTATTGCTTGTATTTATCATGT CTCTTAATGGCATTCTTCTTTACTTAAACCGTGAAACGGCGAAATAA
Upstream 100 bases:
>100_bases GAAAGGCTACATCTCAGTTAACTAATTTCTACCCTATTGCCTGACCTGCGAAGGTTGGGCATTTTTCCATTTCGAATTTT TCGACATGTGAGTATTTATT
Downstream 100 bases:
>100_bases GATCATGAATAAATTAAAAAAACAGCGTCAAATAAAAGACCAAATTGCTTCAGGATTCATTTGGTTATCAGCTGCAATTA CTGTAGGTTTCTTATTTTGG
Product: phosphate ABC transporter, permease protein PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTIAMNNQSTENQVKPSNNPLREKKRVDWRERIFHGLFLSCAVIGIVSLATIAYFIIKESIPAFQQAGVSGIVLGQDWLP PALYGVFTMIVASIVSTFGAVLVGVPVGILTAIFIAEIAPKQVADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQDIFQV PAGNTILAGIIVLGVMILPTVITVSETSIRAVPSTYREGSLALGASKIFTIFRILLPAARSGIMTGVILGIARALGETMA IIMVMGNAPAMPEGILDSARTLTANIAIEMSYASGIHANALYATGVVLLVFIMSLNGILLYLNRETAK
Sequences:
>Translated_308_residues MTIAMNNQSTENQVKPSNNPLREKKRVDWRERIFHGLFLSCAVIGIVSLATIAYFIIKESIPAFQQAGVSGIVLGQDWLP PALYGVFTMIVASIVSTFGAVLVGVPVGILTAIFIAEIAPKQVADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQDIFQV PAGNTILAGIIVLGVMILPTVITVSETSIRAVPSTYREGSLALGASKIFTIFRILLPAARSGIMTGVILGIARALGETMA IIMVMGNAPAMPEGILDSARTLTANIAIEMSYASGIHANALYATGVVLLVFIMSLNGILLYLNRETAK >Mature_307_residues TIAMNNQSTENQVKPSNNPLREKKRVDWRERIFHGLFLSCAVIGIVSLATIAYFIIKESIPAFQQAGVSGIVLGQDWLPP ALYGVFTMIVASIVSTFGAVLVGVPVGILTAIFIAEIAPKQVADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQDIFQVP AGNTILAGIIVLGVMILPTVITVSETSIRAVPSTYREGSLALGASKIFTIFRILLPAARSGIMTGVILGIARALGETMAI IMVMGNAPAMPEGILDSARTLTANIAIEMSYASGIHANALYATGVVLLVFIMSLNGILLYLNRETAK
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=303, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1790163, Length=239, Percent_Identity=30.1255230125523, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32678; Mature: 32546
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAMNNQSTENQVKPSNNPLREKKRVDWRERIFHGLFLSCAVIGIVSLATIAYFIIKES CEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IPAFQQAGVSGIVLGQDWLPPALYGVFTMIVASIVSTFGAVLVGVPVGILTAIFIAEIAP CCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH KQVADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQDIFQVPAGNTILAGIIVLGVMILPT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VITVSETSIRAVPSTYREGSLALGASKIFTIFRILLPAARSGIMTGVILGIARALGETMA HHHCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IIMVMGNAPAMPEGILDSARTLTANIAIEMSYASGIHANALYATGVVLLVFIMSLNGILL EEEEECCCCCCCHHHHHHHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEE YLNRETAK EEECCCCC >Mature Secondary Structure TIAMNNQSTENQVKPSNNPLREKKRVDWRERIFHGLFLSCAVIGIVSLATIAYFIIKES EEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IPAFQQAGVSGIVLGQDWLPPALYGVFTMIVASIVSTFGAVLVGVPVGILTAIFIAEIAP CCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH KQVADIIRPAVELLAGIPSVVYGFFGLVIIVPLIQDIFQVPAGNTILAGIIVLGVMILPT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VITVSETSIRAVPSTYREGSLALGASKIFTIFRILLPAARSGIMTGVILGIARALGETMA HHHCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE IIMVMGNAPAMPEGILDSARTLTANIAIEMSYASGIHANALYATGVVLLVFIMSLNGILL EEEEECCCCCCCHHHHHHHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEE YLNRETAK EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]