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The map label for this gene is ygeA [C]

Identifier: 59712154

GI number: 59712154

Start: 1731409

End: 1732119

Strand: Direct

Name: ygeA [C]

Synonym: VF_1547

Alternate gene names: 59712154

Gene position: 1731409-1732119 (Clockwise)

Preceding gene: 59712153

Following gene: 59712161

Centisome position: 59.75

GC content: 40.51

Gene sequence:

>711_bases
ATGAACAAGAAATTAGGTATTTTAGGCGGTATGGGACCTTTAGCAACGGTTGAGTTTATGTTGAAGATCATTAGTCAAAC
CCCTGCACATAATGACCAAGAACACATTCCGATGGTAGTAAGTAGCGTTCCACAAATCCCTGACAGAACCGCTTTTATTA
TGGGGCATGGACAAGATCCTTACCCTGAATTAAAACACAGCTTTGAGCAACTTGAGCGATCTGGTGCTGAATGTATTGTT
ATCCCTTGTAATACCGCTCATTATTGGTATCCACAACTGAGTGCGACTAGCCATGTGCATACCATCAGTATCATCGATAG
TGTTGTTCAAGAAGCGCAAAATCGTCGGTATAAAACCGTTGGCTTATTAGCTACCACGGCAACAATGAAAGCAAGAATGT
ACCAACAAAAACTTAATCAATATCATATTGAGGTCATTGAAACTGATGACATTCAACAACGTGATGTCATGCAGGGAATT
TACGAAGTAAAAGCAGGAAATGTAGAAAAAGGAAAAGCATTAATGCTACCAGTATTCGAGTCAATGCTCGCTCAAGGCGC
TGAGGCTGTCATTTTAGGTTGCACTGAAATTCCAGTTGCTCTGGCAGAACAAAACCTCAAGCAACCACAACAATGTTTAG
ACTCACTGGAAATCTTAGCTAAGTGTTGTGTTGATTGGTCTTATGAAGAACAAGCCGCTTTAGCAAGTTAA

Upstream 100 bases:

>100_bases
TAACAGGTGTCATTGTTGCCATTGGCTTTGGTTTCTTACTCGCTCCAGCAGTGCTTTAGCACTTACTACAACGCGTATTT
CATTTAAAGGAGTAAATATT

Downstream 100 bases:

>100_bases
CGATTTCTTCTTACTGAATTCACCGCCATGATGCAAAAAACGACAAGTAACAATAATGGTAATAACCAAAGTACGTATGT
TTTAGCATTTAATGGCGGTT

Product: aspartate racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNKKLGILGGMGPLATVEFMLKIISQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGQDPYPELKHSFEQLERSGAECIV
IPCNTAHYWYPQLSATSHVHTISIIDSVVQEAQNRRYKTVGLLATTATMKARMYQQKLNQYHIEVIETDDIQQRDVMQGI
YEVKAGNVEKGKALMLPVFESMLAQGAEAVILGCTEIPVALAEQNLKQPQQCLDSLEILAKCCVDWSYEEQAALAS

Sequences:

>Translated_236_residues
MNKKLGILGGMGPLATVEFMLKIISQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGQDPYPELKHSFEQLERSGAECIV
IPCNTAHYWYPQLSATSHVHTISIIDSVVQEAQNRRYKTVGLLATTATMKARMYQQKLNQYHIEVIETDDIQQRDVMQGI
YEVKAGNVEKGKALMLPVFESMLAQGAEAVILGCTEIPVALAEQNLKQPQQCLDSLEILAKCCVDWSYEEQAALAS
>Mature_236_residues
MNKKLGILGGMGPLATVEFMLKIISQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGQDPYPELKHSFEQLERSGAECIV
IPCNTAHYWYPQLSATSHVHTISIIDSVVQEAQNRRYKTVGLLATTATMKARMYQQKLNQYHIEVIETDDIQQRDVMQGI
YEVKAGNVEKGKALMLPVFESMLAQGAEAVILGCTEIPVALAEQNLKQPQQCLDSLEILAKCCVDWSYEEQAALAS

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 26240; Mature: 26240

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS00923 ASP_GLU_RACEMASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLGILGGMGPLATVEFMLKIISQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGQDP
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCC
YPELKHSFEQLERSGAECIVIPCNTAHYWYPQLSATSHVHTISIIDSVVQEAQNRRYKTV
CHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
GLLATTATMKARMYQQKLNQYHIEVIETDDIQQRDVMQGIYEVKAGNVEKGKALMLPVFE
HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHH
SMLAQGAEAVILGCTEIPVALAEQNLKQPQQCLDSLEILAKCCVDWSYEEQAALAS
HHHHCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure
MNKKLGILGGMGPLATVEFMLKIISQTPAHNDQEHIPMVVSSVPQIPDRTAFIMGHGQDP
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCC
YPELKHSFEQLERSGAECIVIPCNTAHYWYPQLSATSHVHTISIIDSVVQEAQNRRYKTV
CHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
GLLATTATMKARMYQQKLNQYHIEVIETDDIQQRDVMQGIYEVKAGNVEKGKALMLPVFE
HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHH
SMLAQGAEAVILGCTEIPVALAEQNLKQPQQCLDSLEILAKCCVDWSYEEQAALAS
HHHHCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1705542 [H]