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The map label for this gene is yohJ [C]

Identifier: 59712090

GI number: 59712090

Start: 1642114

End: 1642464

Strand: Direct

Name: yohJ [C]

Synonym: VF_1483

Alternate gene names: 59712090

Gene position: 1642114-1642464 (Clockwise)

Preceding gene: 59712089

Following gene: 59712091

Centisome position: 56.67

GC content: 37.61

Gene sequence:

>351_bases
ATGATTAAATATCTTTATTCTTTCGCTTGGATCTTCGCCTCGTTGTTTGCTGGTAACGGCATTCAATCTTGGTTGAACAT
ATCTGTTCCGGGAAGCATTATTGGAATGCTTATTTTATTCACCGCTATGGTTATCGGTATTTGCAAACCAGATTGGACAG
CCACAGGTTGCCAATTTTTCATGCGCAATATGCTGATCTTGTTTATTCCTATTTCGGTAGGTTTAATGACCCATTTTGAT
TTGCTACTTAACAATGCAATTCCAATTATTGTGAGTACGGCGGGTGGTTCATTATTAGTATTGGTTTGCTTAGCACTCTT
TATCGACAAAATTGATAGAGGTAACAGCTAA

Upstream 100 bases:

>100_bases
ATGAAGCGAGTTTTGAAAATCTATACCTTGAGTCCGAAGGTAATGACAAAAAAGTGGCTATTTTAAAAGCCGTGTATAAC
TACGTACAACAATTAATATC

Downstream 100 bases:

>100_bases
TGTGGGTCATTCTTACGCTTATCGTTTTTTACTCTGCTCGTTGGTTTGCAAAACGTTTCCCTCACCCAGTGAATAACCCG
TTATTGCTGAGTGTGTGTAT

Product: murein hydrolase exporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MIKYLYSFAWIFASLFAGNGIQSWLNISVPGSIIGMLILFTAMVIGICKPDWTATGCQFFMRNMLILFIPISVGLMTHFD
LLLNNAIPIIVSTAGGSLLVLVCLALFIDKIDRGNS

Sequences:

>Translated_116_residues
MIKYLYSFAWIFASLFAGNGIQSWLNISVPGSIIGMLILFTAMVIGICKPDWTATGCQFFMRNMLILFIPISVGLMTHFD
LLLNNAIPIIVSTAGGSLLVLVCLALFIDKIDRGNS
>Mature_116_residues
MIKYLYSFAWIFASLFAGNGIQSWLNISVPGSIIGMLILFTAMVIGICKPDWTATGCQFFMRNMLILFIPISVGLMTHFD
LLLNNAIPIIVSTAGGSLLVLVCLALFIDKIDRGNS

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=98, Percent_Identity=45.9183673469388, Blast_Score=86, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 12706; Mature: 12706

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYLYSFAWIFASLFAGNGIQSWLNISVPGSIIGMLILFTAMVIGICKPDWTATGCQFF
CHHHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
MRNMLILFIPISVGLMTHFDLLLNNAIPIIVSTAGGSLLVLVCLALFIDKIDRGNS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIKYLYSFAWIFASLFAGNGIQSWLNISVPGSIIGMLILFTAMVIGICKPDWTATGCQFF
CHHHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
MRNMLILFIPISVGLMTHFDLLLNNAIPIIVSTAGGSLLVLVCLALFIDKIDRGNS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA