Click here to switch to the map view.

The map label for this gene is 59712082

Identifier: 59712082

GI number: 59712082

Start: 1632426

End: 1633325

Strand: Reverse

Name: 59712082

Synonym: VF_1475

Alternate gene names: NA

Gene position: 1633325-1632426 (Counterclockwise)

Preceding gene: 59712086

Following gene: 59712079

Centisome position: 56.37

GC content: 41.33

Gene sequence:

>900_bases
ATGCATACATTAGAGCAAGTGAGCGCTTTTGTTGCCGTGTATGAACATGGATCATACAGCAGTGCAGCGCGAGAGCTTAA
AAAATCTCGAACCACAGTGCGTGAACACGTGGTGACCTATGAAGACTTATTAGGGTATTCATTGTTTGTGATAGAAGGCA
GAAAAGCGATTCCCACAGAGAAAGCCGAGCAGCTGTATCACCGTGCTAAGTTAGTTGAAAAACAAAATCGCTCTTTGTTT
GTGCAAAGTCAAGCCTTGTACGATTCTAACGTTCATACCATTACGATTTACTATGATGTGATCACGCCGCTCAGTTTAAT
TACACACATTGAAAACCGTGTGATGGATTATAACTCAGACATCATTATTAATTGGAAGCACCGAACTCGGCAGGAAGCAA
TGGATAAATTGCAAGAAGGTGAGTGTGATATTGCCATTATGCCGTATCGTGGACAGCTGTTTGCAGAGAAAGAAGTTACA
TGGAAAGCGATAAAACCCATCCAAGTTGGCTGTTATGCAAGCGTCAATTCACCTTTGGCATTAATTGATGATTTAAGACT
CGAAAATCTGATGCTAGAGACACAATATGTCACCGAGAACTTTGCGACCTTAAAACTGAATTTTGCGTCGATTCAGGTTT
CCCCAAAAATGCACACCGTTAGTAATAACGATCTGTTGTGTGAGTTAGTAAAACAACATGGCTGGACAATTATGCCAAGG
CATTACATGACACCATACGTAGAGAGAGGCGAACTTGTCGATCTCAATTTGAAAGAGCTTGGGAACAATCTTTCTTTTGG
CCTCAATGCTTTTTATTGTTATGGAAAACCAGATGCAGAAGTGTTTGGGTTTATTCTCGAGTGGATTGAAGAATGGACTG
AGGCGTTGGAGCGTTGTTGA

Upstream 100 bases:

>100_bases
GAGTAGGATTTTTTCATGGAATACCAAAACAAAGAAATCGATTATGATAGGGTATGCCTAACAAGTTGGGTGGGTATATA
ACAATCGAAGGAGTGATTGA

Downstream 100 bases:

>100_bases
TTGCTTTAAATTGAATTTGAGTCAAACCTAGAGCGAAGGGTGATGTTTGTTTATTCGCAATGAGAAAGCCAACTTGCTTG
ATATCGTTCGCCACGAGTTC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulators LysR Family; Transcriptional Regulator; Transcriptional Regulator LysR Family Protein; LysR Family Regulatory Protein; Regulatory Protein LysR

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MHTLEQVSAFVAVYEHGSYSSAARELKKSRTTVREHVVTYEDLLGYSLFVIEGRKAIPTEKAEQLYHRAKLVEKQNRSLF
VQSQALYDSNVHTITIYYDVITPLSLITHIENRVMDYNSDIIINWKHRTRQEAMDKLQEGECDIAIMPYRGQLFAEKEVT
WKAIKPIQVGCYASVNSPLALIDDLRLENLMLETQYVTENFATLKLNFASIQVSPKMHTVSNNDLLCELVKQHGWTIMPR
HYMTPYVERGELVDLNLKELGNNLSFGLNAFYCYGKPDAEVFGFILEWIEEWTEALERC

Sequences:

>Translated_299_residues
MHTLEQVSAFVAVYEHGSYSSAARELKKSRTTVREHVVTYEDLLGYSLFVIEGRKAIPTEKAEQLYHRAKLVEKQNRSLF
VQSQALYDSNVHTITIYYDVITPLSLITHIENRVMDYNSDIIINWKHRTRQEAMDKLQEGECDIAIMPYRGQLFAEKEVT
WKAIKPIQVGCYASVNSPLALIDDLRLENLMLETQYVTENFATLKLNFASIQVSPKMHTVSNNDLLCELVKQHGWTIMPR
HYMTPYVERGELVDLNLKELGNNLSFGLNAFYCYGKPDAEVFGFILEWIEEWTEALERC
>Mature_299_residues
MHTLEQVSAFVAVYEHGSYSSAARELKKSRTTVREHVVTYEDLLGYSLFVIEGRKAIPTEKAEQLYHRAKLVEKQNRSLF
VQSQALYDSNVHTITIYYDVITPLSLITHIENRVMDYNSDIIINWKHRTRQEAMDKLQEGECDIAIMPYRGQLFAEKEVT
WKAIKPIQVGCYASVNSPLALIDDLRLENLMLETQYVTENFATLKLNFASIQVSPKMHTVSNNDLLCELVKQHGWTIMPR
HYMTPYVERGELVDLNLKELGNNLSFGLNAFYCYGKPDAEVFGFILEWIEEWTEALERC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34613; Mature: 34613

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTLEQVSAFVAVYEHGSYSSAARELKKSRTTVREHVVTYEDLLGYSLFVIEGRKAIPTE
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCH
KAEQLYHRAKLVEKQNRSLFVQSQALYDSNVHTITIYYDVITPLSLITHIENRVMDYNSD
HHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHEECCCC
IIINWKHRTRQEAMDKLQEGECDIAIMPYRGQLFAEKEVTWKAIKPIQVGCYASVNSPLA
EEEEECHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCEEECCCEEEEEEECCCCCHH
LIDDLRLENLMLETQYVTENFATLKLNFASIQVSPKMHTVSNNDLLCELVKQHGWTIMPR
HHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCEEECCCCHHHHHHHHHCCCEEECH
HYMTPYVERGELVDLNLKELGNNLSFGLNAFYCYGKPDAEVFGFILEWIEEWTEALERC
HHCCCCCCCCCEEEEEHHHCCCCCEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHTLEQVSAFVAVYEHGSYSSAARELKKSRTTVREHVVTYEDLLGYSLFVIEGRKAIPTE
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCH
KAEQLYHRAKLVEKQNRSLFVQSQALYDSNVHTITIYYDVITPLSLITHIENRVMDYNSD
HHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHEECCCC
IIINWKHRTRQEAMDKLQEGECDIAIMPYRGQLFAEKEVTWKAIKPIQVGCYASVNSPLA
EEEEECHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCEEECCCEEEEEEECCCCCHH
LIDDLRLENLMLETQYVTENFATLKLNFASIQVSPKMHTVSNNDLLCELVKQHGWTIMPR
HHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCEEECCCCHHHHHHHHHCCCEEECH
HYMTPYVERGELVDLNLKELGNNLSFGLNAFYCYGKPDAEVFGFILEWIEEWTEALERC
HHCCCCCCCCCEEEEEHHHCCCCCEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA