| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712079
Identifier: 59712079
GI number: 59712079
Start: 1631297
End: 1631482
Strand: Reverse
Name: 59712079
Synonym: VF_1472
Alternate gene names: NA
Gene position: 1631482-1631297 (Counterclockwise)
Preceding gene: 59712082
Following gene: 59712078
Centisome position: 56.31
GC content: 44.62
Gene sequence:
>186_bases ATGATTCGGTTCTTAGTAGCGAGCGATGACGTTATGGGGAGCAACATGAAAAAATCACAGTTGCCAGAAAAGCTATGCGT TGTTTGCCAGAGACCATTTCGTTGGCGAAAGAAATGGGAGCGAGACTGGCCAATGGTTAAATATTGCTCCAAGCGTTGTC GGTCTTCACGACATCAAAGTGAATAA
Upstream 100 bases:
>100_bases CCCTATACCTAGATCACCATTTCGATTAACTAGTTTGAATTAGTTGATCTTTTTGTGAACCACAAAGTGCTTTCCTGCGT AATTTCTCTGTAGGTCGGTA
Downstream 100 bases:
>100_bases CAAATCCACACATGAAGATTTAAGATAGAGGATGATTATGAATGCCACCGCTGACCGCTTACGACTCATTTTAGGTGACC AATTAAATGCCAGCCATTCA
Product: zinc finger protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MIRFLVASDDVMGSNMKKSQLPEKLCVVCQRPFRWRKKWERDWPMVKYCSKRCRSSRHQSE
Sequences:
>Translated_61_residues MIRFLVASDDVMGSNMKKSQLPEKLCVVCQRPFRWRKKWERDWPMVKYCSKRCRSSRHQSE >Mature_61_residues MIRFLVASDDVMGSNMKKSQLPEKLCVVCQRPFRWRKKWERDWPMVKYCSKRCRSSRHQSE
Specific function: Unknown
COG id: COG4338
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7464; Mature: 7464
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 13.1 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 13.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFLVASDDVMGSNMKKSQLPEKLCVVCQRPFRWRKKWERDWPMVKYCSKRCRSSRHQS CEEEEECCCCCCCCCCCHHHCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCC E C >Mature Secondary Structure MIRFLVASDDVMGSNMKKSQLPEKLCVVCQRPFRWRKKWERDWPMVKYCSKRCRSSRHQS CEEEEECCCCCCCCCCCHHHCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA