Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

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The map label for this gene is 59712080

Identifier: 59712080

GI number: 59712080

Start: 1631647

End: 1631922

Strand: Direct

Name: 59712080

Synonym: VF_1473

Alternate gene names: NA

Gene position: 1631647-1631922 (Clockwise)

Preceding gene: 59712077

Following gene: 59712081

Centisome position: 56.31

GC content: 36.23

Gene sequence:

>276_bases
ATGGATAACAAACTGACGATTAAAGAATTTCTTAGAGTATTTGATTGCGTTCGTTCATCTGGAAAGTTACTGGATAATAG
ATATGTATTAGACGAGATATCCGCATGGCATGATTACGATGGGTATACCTGTTGGCTGGGCTATAAAGATGTGACCGTCA
CGTTGATGTTTCATGGTTCACTTAAAATCGAATTCGACAAATCATCAAACTACTCTGATTTCACCAACCAATGTTTAGCA
ATGATCACAGCAAATCATAGTGTAAAGGAAAGTTAA

Upstream 100 bases:

>100_bases
AAACTAGTTAATCGAAATGGTGATCTAGGTATAGGGCAAACTCGTAGTTAGTTTAGTAATAAAAAAGTACTTTTATTTGT
ATACGAACGAGGTGTTACAT

Downstream 100 bases:

>100_bases
GATGAATGACCAATATCTTGAAATTATTGAATTTACACAGCCTAACGAGCATCAAAAATGGTTAGCCATAAATGACAACG
TAATGGGTGGTATTTCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MDNKLTIKEFLRVFDCVRSSGKLLDNRYVLDEISAWHDYDGYTCWLGYKDVTVTLMFHGSLKIEFDKSSNYSDFTNQCLA
MITANHSVKES

Sequences:

>Translated_91_residues
MDNKLTIKEFLRVFDCVRSSGKLLDNRYVLDEISAWHDYDGYTCWLGYKDVTVTLMFHGSLKIEFDKSSNYSDFTNQCLA
MITANHSVKES
>Mature_91_residues
MDNKLTIKEFLRVFDCVRSSGKLLDNRYVLDEISAWHDYDGYTCWLGYKDVTVTLMFHGSLKIEFDKSSNYSDFTNQCLA
MITANHSVKES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10571; Mature: 10571

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKLTIKEFLRVFDCVRSSGKLLDNRYVLDEISAWHDYDGYTCWLGYKDVTVTLMFHGS
CCCCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCEEEEECCCCEEEEEEEECE
LKIEFDKSSNYSDFTNQCLAMITANHSVKES
EEEEECCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDNKLTIKEFLRVFDCVRSSGKLLDNRYVLDEISAWHDYDGYTCWLGYKDVTVTLMFHGS
CCCCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCEEEEECCCCEEEEEEEECE
LKIEFDKSSNYSDFTNQCLAMITANHSVKES
EEEEECCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA