BacMap

Definition	Vibrio fischeri ES114 chromosome I, complete genome.
Accession	NC_006840
Length	2,897,536

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The map label for this gene is rbsA

Identifier: 59712052

GI number: 59712052

Start: 1595273

End: 1596787

Strand: Direct

Name: rbsA

Synonym: VF_1445

Alternate gene names: 59712052

Gene position: 1595273-1596787 (Clockwise)

Preceding gene: 59712051

Following gene: 59712053

Centisome position: 55.06

GC content: 41.32

Gene sequence:

>1515_bases
ATGACTCAAGCTATCTTAGAATTAAACGGCATTGAGAAAGCCTTCCCCGGAGTGAAAGCTCTGGATGGTGCTTGTCTTAA
TGTCTATCCCGGCAAAGTCATGGCCCTGATGGGTGAAAATGGCGCGGGTAAATCAACCTTAATGAAGTCACTAACGGGCA
TCTACGCAATGGATGCTGGCGAAATCCGCTATGAAGGCAAAGCGGTTAACTTTAATGGTCCTAAACACTCTCAAGAATCT
GGTATTAGTATTATTCACCAAGAGTTGAACCTAATTCCTGAATTGACCATTGCAGAAAACATCTTCTTAGGCCGTGAAAA
AACCAATGCGTTTGGCGGGATCAAATGGTCTGAAATGTACAAAGATGCTGATGCCCTACTCAAACGTTTGAATGTAAAAC
ACCACTCTCGCCAACTATTAGGTGAACTGAGTTTAGGTGAACAACAAATGGTTGAAATTGCCAAAGCTCTATCATTCAAA
TCCAAAGTTATCATCATGGATGAACCGACAGATGCGTTAACGGATACCGAAACCGAATCGCTATTTAAAGTAATTAACGA
ACTACGTGATGAAGGTTGTGGCATTGTTTATATCTCGCACCGTCTAAAAGAGATCTTCGAGATCTGCGATGACATTACAG
TACTGCGTGATGGTAAATTCATCGGTGAACGTGTCGTTGCGGATATCGATGAAGACACACTAATTGAAATGATGGTAGGC
CGTCGTCTTGATGAGCAATACCCTCGCATCGATGTTCAACATGGTGAAAAATCCCTAGAGCTATTCGATGTATCAGGTCC
TGGTGTTCATAATGTTAGCTTTTCATTAGACCGTGGGGAAATCCTTGGGATCTCAGGTTTAATGGGCGCAGGCCGTACTG
AATTGATGAAAATCATCTACGGTGCACTGCCAATGACTTGTGGTGCTATCAAGCTAAACAACAAAATGATTAACCCTATT
TCACCACGTGATGGATTAGCTAATGGCATCGCCTACATCTCAGAAGACCGTAAAGGTGATGGTCTGGTTCTTGGATTATC
GGTTAAAGAGAACATGTCGATTTGTTCTTTAGATCAATTATCGAAAGGCATTCAATTAGATCATCATGCGGAAGTCACCG
CGGTTGAAGACTTTATTCGTTTATTCAACATTAAGACCCCTACTCGTGATCAAATCATTGGTAATTTATCTGGTGGTAAT
CAACAAAAAGTAGCCATTGCTAAAGGATTAATGACTCGTCCAAAAGTATTGATTTTAGATGAACCAACACGTGGCGTTGA
TGTTGGTGCGAAAAAAGAGATCTACCAATTAATTAACCAATTTAAAGCGGAAGGCATGAGCATCATTTTAGTCTCATCTG
AAATGCCTGAAGTTCTAGGAATGAGTGACCGCATCCTAGTTATGCATGAAGGCCGTATTAGTGGCGAATTCATGGCAAAA
GATGCCGACCAAGAAAAATTATTGGCTTGTGCAGTAGGTAAAACTGTTGAGCAAAATGTAGAGGTAACAGCATGA

Upstream 100 bases:

>100_bases
CCATACTCGTGAGAGTAAAGCGATCGTTCGAACTGGTGAATGTACCCCTTATGCCAATGTAATTTTTCAATCTGGCGTTG
TTTTTTAAGTAGGATACGTT

Downstream 100 bases:

>100_bases
GCACCAAATCAATGACTTCAACTGAAACACAACAAAAGAAAGGCGGCATTTTTTCTAAAGAGTGGCTGATTGAACAAAAA
TCATTAATCGCGCTATTGCT

Product: D-ribose transporter ATP binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MTQAILELNGIEKAFPGVKALDGACLNVYPGKVMALMGENGAGKSTLMKSLTGIYAMDAGEIRYEGKAVNFNGPKHSQES
GISIIHQELNLIPELTIAENIFLGREKTNAFGGIKWSEMYKDADALLKRLNVKHHSRQLLGELSLGEQQMVEIAKALSFK
SKVIIMDEPTDALTDTETESLFKVINELRDEGCGIVYISHRLKEIFEICDDITVLRDGKFIGERVVADIDEDTLIEMMVG
RRLDEQYPRIDVQHGEKSLELFDVSGPGVHNVSFSLDRGEILGISGLMGAGRTELMKIIYGALPMTCGAIKLNNKMINPI
SPRDGLANGIAYISEDRKGDGLVLGLSVKENMSICSLDQLSKGIQLDHHAEVTAVEDFIRLFNIKTPTRDQIIGNLSGGN
QQKVAIAKGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMAK
DADQEKLLACAVGKTVEQNVEVTA

Sequences:

>Translated_504_residues
MTQAILELNGIEKAFPGVKALDGACLNVYPGKVMALMGENGAGKSTLMKSLTGIYAMDAGEIRYEGKAVNFNGPKHSQES
GISIIHQELNLIPELTIAENIFLGREKTNAFGGIKWSEMYKDADALLKRLNVKHHSRQLLGELSLGEQQMVEIAKALSFK
SKVIIMDEPTDALTDTETESLFKVINELRDEGCGIVYISHRLKEIFEICDDITVLRDGKFIGERVVADIDEDTLIEMMVG
RRLDEQYPRIDVQHGEKSLELFDVSGPGVHNVSFSLDRGEILGISGLMGAGRTELMKIIYGALPMTCGAIKLNNKMINPI
SPRDGLANGIAYISEDRKGDGLVLGLSVKENMSICSLDQLSKGIQLDHHAEVTAVEDFIRLFNIKTPTRDQIIGNLSGGN
QQKVAIAKGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMAK
DADQEKLLACAVGKTVEQNVEVTA
>Mature_503_residues
TQAILELNGIEKAFPGVKALDGACLNVYPGKVMALMGENGAGKSTLMKSLTGIYAMDAGEIRYEGKAVNFNGPKHSQESG
ISIIHQELNLIPELTIAENIFLGREKTNAFGGIKWSEMYKDADALLKRLNVKHHSRQLLGELSLGEQQMVEIAKALSFKS
KVIIMDEPTDALTDTETESLFKVINELRDEGCGIVYISHRLKEIFEICDDITVLRDGKFIGERVVADIDEDTLIEMMVGR
RLDEQYPRIDVQHGEKSLELFDVSGPGVHNVSFSLDRGEILGISGLMGAGRTELMKIIYGALPMTCGAIKLNNKMINPIS
PRDGLANGIAYISEDRKGDGLVLGLSVKENMSICSLDQLSKGIQLDHHAEVTAVEDFIRLFNIKTPTRDQIIGNLSGGNQ
QKVAIAKGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMAKD
ADQEKLLACAVGKTVEQNVEVTA

Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system

COG id: COG1129

COG function: function code G; ABC-type sugar transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains

Homologues:

Organism=Homo sapiens, GI105990541, Length=221, Percent_Identity=29.4117647058824, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI27881501, Length=216, Percent_Identity=29.1666666666667, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI30795238, Length=216, Percent_Identity=29.1666666666667, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI9961252, Length=224, Percent_Identity=33.9285714285714, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4505771, Length=224, Percent_Identity=33.9285714285714, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI9961250, Length=224, Percent_Identity=33.9285714285714, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI31657092, Length=218, Percent_Identity=27.0642201834862, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI21536376, Length=221, Percent_Identity=26.2443438914027, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI42741659, Length=207, Percent_Identity=31.8840579710145, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI150417984, Length=221, Percent_Identity=24.8868778280543, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI45446740, Length=205, Percent_Identity=26.3414634146341, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI47078218, Length=205, Percent_Identity=26.3414634146341, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI255708477, Length=207, Percent_Identity=30.9178743961353, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI6005701, Length=209, Percent_Identity=25.8373205741627, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI11967971, Length=213, Percent_Identity=29.1079812206573, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI171184400, Length=225, Percent_Identity=30.6666666666667, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI21536378, Length=214, Percent_Identity=29.9065420560748, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI27477115, Length=209, Percent_Identity=25.3588516746411, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI156105685, Length=214, Percent_Identity=30.8411214953271, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI9955963, Length=217, Percent_Identity=30.8755760368664, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI148612844, Length=213, Percent_Identity=31.924882629108, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI90421313, Length=225, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI116734710, Length=296, Percent_Identity=22.972972972973, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI27262624, Length=221, Percent_Identity=24.4343891402715, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI27262626, Length=221, Percent_Identity=24.4343891402715, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI27436953, Length=208, Percent_Identity=27.4038461538462, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI153792144, Length=211, Percent_Identity=23.696682464455, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI4557481, Length=197, Percent_Identity=29.4416243654822, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI11967969, Length=216, Percent_Identity=25.9259259259259, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1790190, Length=500, Percent_Identity=70.2, Blast_Score=711, Evalue=0.0,
Organism=Escherichia coli, GI1788472, Length=493, Percent_Identity=44.0162271805274, Blast_Score=430, Evalue=1e-121,
Organism=Escherichia coli, GI1789991, Length=500, Percent_Identity=43.6, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1788210, Length=495, Percent_Identity=42.6262626262626, Blast_Score=389, Evalue=1e-109,
Organism=Escherichia coli, GI1790525, Length=508, Percent_Identity=42.9133858267717, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI48995001, Length=476, Percent_Identity=39.9159663865546, Blast_Score=362, Evalue=1e-101,
Organism=Escherichia coli, GI1787792, Length=501, Percent_Identity=38.9221556886228, Blast_Score=322, Evalue=2e-89,
Organism=Escherichia coli, GI1788897, Length=474, Percent_Identity=36.4978902953587, Blast_Score=297, Evalue=1e-81,
Organism=Escherichia coli, GI48994943, Length=494, Percent_Identity=25.3036437246964, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1789864, Length=230, Percent_Identity=29.5652173913043, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1788506, Length=530, Percent_Identity=21.6981132075472, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1787029, Length=246, Percent_Identity=29.2682926829268, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787105, Length=224, Percent_Identity=29.0178571428571, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI1790544, Length=233, Percent_Identity=31.7596566523605, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI1788761, Length=220, Percent_Identity=27.2727272727273, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI145693107, Length=526, Percent_Identity=23.574144486692, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1789593, Length=231, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87081791, Length=218, Percent_Identity=26.605504587156, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI87082268, Length=210, Percent_Identity=30, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1787089, Length=221, Percent_Identity=27.1493212669683, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1788225, Length=223, Percent_Identity=28.2511210762332, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1786319, Length=217, Percent_Identity=28.110599078341, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788165, Length=213, Percent_Identity=28.6384976525822, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI87081782, Length=246, Percent_Identity=28.0487804878049, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI87081709, Length=223, Percent_Identity=26.0089686098655, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1790739, Length=206, Percent_Identity=26.6990291262136, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1786872, Length=185, Percent_Identity=29.7297297297297, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1787370, Length=280, Percent_Identity=25, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87081834, Length=207, Percent_Identity=28.5024154589372, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1789672, Length=221, Percent_Identity=25.7918552036199, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1789873, Length=223, Percent_Identity=27.8026905829596, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786398, Length=232, Percent_Identity=26.7241379310345, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI48994997, Length=212, Percent_Identity=28.7735849056604, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787712, Length=220, Percent_Identity=24.5454545454545, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1788450, Length=221, Percent_Identity=27.6018099547511, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786345, Length=235, Percent_Identity=27.6595744680851, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI48994883, Length=248, Percent_Identity=29.0322580645161, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787143, Length=220, Percent_Identity=31.3636363636364, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786253, Length=196, Percent_Identity=27.5510204081633, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1789962, Length=237, Percent_Identity=27.0042194092827, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786803, Length=248, Percent_Identity=23.7903225806452, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786703, Length=204, Percent_Identity=29.9019607843137, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786654, Length=292, Percent_Identity=25.6849315068493, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1789032, Length=202, Percent_Identity=26.2376237623762, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1790467, Length=217, Percent_Identity=25.8064516129032, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1786563, Length=217, Percent_Identity=24.4239631336406, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1787500, Length=210, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787758, Length=210, Percent_Identity=27.1428571428571, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790534, Length=188, Percent_Identity=29.7872340425532, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787164, Length=227, Percent_Identity=24.2290748898678, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786653, Length=213, Percent_Identity=25.3521126760563, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1789891, Length=214, Percent_Identity=25.2336448598131, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788644, Length=264, Percent_Identity=23.8636363636364, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786698, Length=214, Percent_Identity=21.4953271028037, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787547, Length=251, Percent_Identity=24.7011952191235, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI87082267, Length=223, Percent_Identity=26.457399103139, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789890, Length=220, Percent_Identity=27.7272727272727, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787112, Length=223, Percent_Identity=27.3542600896861, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1789586, Length=211, Percent_Identity=27.0142180094787, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=206, Percent_Identity=27.6699029126214, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17541710, Length=214, Percent_Identity=32.7102803738318, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71984940, Length=206, Percent_Identity=34.9514563106796, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI25146777, Length=234, Percent_Identity=29.9145299145299, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17558664, Length=222, Percent_Identity=31.0810810810811, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI193211015, Length=208, Percent_Identity=30.2884615384615, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193211017, Length=208, Percent_Identity=30.2884615384615, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17569143, Length=208, Percent_Identity=32.2115384615385, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17569145, Length=193, Percent_Identity=32.6424870466321, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=205, Percent_Identity=31.219512195122, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=224, Percent_Identity=30.8035714285714, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71996809, Length=208, Percent_Identity=29.8076923076923, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=206, Percent_Identity=29.126213592233, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=203, Percent_Identity=31.5270935960591, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193208177, Length=216, Percent_Identity=25, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17567265, Length=208, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17565586, Length=212, Percent_Identity=23.1132075471698, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115534520, Length=261, Percent_Identity=25.2873563218391, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71992290, Length=279, Percent_Identity=26.5232974910394, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=216, Percent_Identity=30.0925925925926, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17510237, Length=207, Percent_Identity=25.1207729468599, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71992080, Length=213, Percent_Identity=27.6995305164319, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=207, Percent_Identity=30.4347826086957, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=205, Percent_Identity=30.2439024390244, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71992066, Length=213, Percent_Identity=27.6995305164319, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25146765, Length=213, Percent_Identity=27.6995305164319, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71992070, Length=213, Percent_Identity=27.6995305164319, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI86564969, Length=213, Percent_Identity=27.6995305164319, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=202, Percent_Identity=32.1782178217822, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71996550, Length=217, Percent_Identity=32.258064516129, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6322640, Length=230, Percent_Identity=27.8260869565217, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323959, Length=216, Percent_Identity=30.0925925925926, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=194, Percent_Identity=27.319587628866, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24666092, Length=242, Percent_Identity=30.9917355371901, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28571209, Length=219, Percent_Identity=27.3972602739726, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI221512771, Length=210, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI281363262, Length=211, Percent_Identity=31.7535545023697, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24653245, Length=211, Percent_Identity=31.7535545023697, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI221500365, Length=267, Percent_Identity=27.7153558052434, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007184, Length=267, Percent_Identity=27.7153558052434, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24643674, Length=219, Percent_Identity=26.9406392694064, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI161076682, Length=245, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI17136592, Length=205, Percent_Identity=26.3414634146341, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI161076684, Length=245, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24581617, Length=245, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24581615, Length=245, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI17136662, Length=211, Percent_Identity=29.3838862559242, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19920532, Length=190, Percent_Identity=29.4736842105263, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24580930, Length=190, Percent_Identity=29.4736842105263, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24659289, Length=221, Percent_Identity=28.5067873303167, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28574533, Length=206, Percent_Identity=27.1844660194175, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI45552357, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582014, Length=207, Percent_Identity=26.5700483091787, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582012, Length=207, Percent_Identity=26.5700483091787, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552345, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552355, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552353, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552343, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552359, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45550972, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552349, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24583969, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641565, Length=243, Percent_Identity=28.3950617283951, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552341, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552335, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574744, Length=199, Percent_Identity=29.1457286432161, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552363, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552361, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552351, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45552347, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45552337, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45552339, Length=202, Percent_Identity=30.1980198019802, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI23397593, Length=219, Percent_Identity=30.1369863013699, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28573571, Length=206, Percent_Identity=24.2718446601942, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI28573573, Length=206, Percent_Identity=24.2718446601942, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RBSA_VIBF1 (Q5E4V6)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_204828.1
- HSSP:   Q58663
- ProteinModelPortal:   Q5E4V6
- SMR:   Q5E4V6
- STRING:   Q5E4V6
- GeneID:   3278742
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_1445
- NMPDR:   fig|312309.3.peg.1445
- eggNOG:   COG1129
- HOGENOM:   HBG758042
- OMA:   LNVYPGK
- PhylomeDB:   Q5E4V6
- ProtClustDB:   PRK10762
- BioCyc:   VFIS312309:VF1445-MONOMER
- HAMAP:   MF_01716
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015861
- InterPro:   IPR003593
- SMART:   SM00382

Pfam domain/function: PF00005 ABC_tran

EC number: =3.6.3.17

Molecular weight: Translated: 55248; Mature: 55117

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2; PS51254 RBSA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAILELNGIEKAFPGVKALDGACLNVYPGKVMALMGENGAGKSTLMKSLTGIYAMDAG
CCCCEEEECCCHHHCCCCHHCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHEEECCC
EIRYEGKAVNFNGPKHSQESGISIIHQELNLIPELTIAENIFLGREKTNAFGGIKWSEMY
CEEECCEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHEEECCCCCCCCCCCCHHHHH
KDADALLKRLNVKHHSRQLLGELSLGEQQMVEIAKALSFKSKVIIMDEPTDALTDTETES
HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH
LFKVINELRDEGCGIVYISHRLKEIFEICDDITVLRDGKFIGERVVADIDEDTLIEMMVG
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHHH
RRLDEQYPRIDVQHGEKSLELFDVSGPGVHNVSFSLDRGEILGISGLMGAGRTELMKIIY
HHHHHHCCEEEECCCCCCEEEEECCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHH
GALPMTCGAIKLNNKMINPISPRDGLANGIAYISEDRKGDGLVLGLSVKENMSICSLDQL
HHHHHCCCEEEECCEEECCCCCCCCHHHCCEEEECCCCCCCEEEEEEECCCCCEECHHHH
SKGIQLDHHAEVTAVEDFIRLFNIKTPTRDQIIGNLSGGNQQKVAIAKGLMTRPKVLILD
HCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCHHHHHCCCCCCEEEEEE
EPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMAK
CCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHCCCCCEEEEECCCCCCCEEEC
DADQEKLLACAVGKTVEQNVEVTA
CCCHHHHHHHHHCCHHHCCCEECC
>Mature Secondary Structure 
TQAILELNGIEKAFPGVKALDGACLNVYPGKVMALMGENGAGKSTLMKSLTGIYAMDAG
CCCEEEECCCHHHCCCCHHCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHEEECCC
EIRYEGKAVNFNGPKHSQESGISIIHQELNLIPELTIAENIFLGREKTNAFGGIKWSEMY
CEEECCEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHEEECCCCCCCCCCCCHHHHH
KDADALLKRLNVKHHSRQLLGELSLGEQQMVEIAKALSFKSKVIIMDEPTDALTDTETES
HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH
LFKVINELRDEGCGIVYISHRLKEIFEICDDITVLRDGKFIGERVVADIDEDTLIEMMVG
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHHH
RRLDEQYPRIDVQHGEKSLELFDVSGPGVHNVSFSLDRGEILGISGLMGAGRTELMKIIY
HHHHHHCCEEEECCCCCCEEEEECCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHH
GALPMTCGAIKLNNKMINPISPRDGLANGIAYISEDRKGDGLVLGLSVKENMSICSLDQL
HHHHHCCCEEEECCEEECCCCCCCCHHHCCEEEECCCCCCCEEEEEEECCCCCEECHHHH
SKGIQLDHHAEVTAVEDFIRLFNIKTPTRDQIIGNLSGGNQQKVAIAKGLMTRPKVLILD
HCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCHHHHHCCCCCCEEEEEE
EPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMAK
CCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHCCCCCEEEEECCCCCCCEEEC
DADQEKLLACAVGKTVEQNVEVTA
CCCHHHHHHHHHCCHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA