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The map label for this gene is 59712050

Identifier: 59712050

GI number: 59712050

Start: 1594247

End: 1594528

Strand: Reverse

Name: 59712050

Synonym: VF_1443

Alternate gene names: NA

Gene position: 1594528-1594247 (Counterclockwise)

Preceding gene: 59712057

Following gene: 59712048

Centisome position: 55.03

GC content: 35.82

Gene sequence:

>282_bases
ATGAGTAGTATTGCAGATGACATCATTAAATCACTAGAGCAAGCGGTTGAAATAAAAAAAGGAAATTTAGAAGGTAACGT
TACACGTTATGAAATAGCAGACGTGAAGGCCATTCGAGAACAGTTACATGTAACACAGAAAGAGTTAGCAATGGCAATTG
ATGTTAGTGTTGATACCGTGAAAAGTTGGGAGCAAGGAAGACGAAACCCAACAGGTTTAGCAAGTAAGGTTCTTAATTTA
TTAAGCAAGGAACCTGAGTTGTATTCTAAATTTTCAGATTAA

Upstream 100 bases:

>100_bases
AAGGAAAAGGGTACTTTCAAATTGATTGATTCTTAAGCTTATGTATACTCGTTACTAGTAGAGTACAATGTACTCCTAGA
TTGAAAAATGAGGTACAACA

Downstream 100 bases:

>100_bases
GTGTAGAGTTTGAAAAATAACATACAATAATTAGTTCATTTTTAGCCGTCAGCATTTTACTGACGGCTAGATATTCATGT
TAAACAAACATATGGTTTGC

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Transcriptional Regulator HTH_3 Domain Protein; Transcriptional Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Containing Protein

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSSIADDIIKSLEQAVEIKKGNLEGNVTRYEIADVKAIREQLHVTQKELAMAIDVSVDTVKSWEQGRRNPTGLASKVLNL
LSKEPELYSKFSD

Sequences:

>Translated_93_residues
MSSIADDIIKSLEQAVEIKKGNLEGNVTRYEIADVKAIREQLHVTQKELAMAIDVSVDTVKSWEQGRRNPTGLASKVLNL
LSKEPELYSKFSD
>Mature_92_residues
SSIADDIIKSLEQAVEIKKGNLEGNVTRYEIADVKAIREQLHVTQKELAMAIDVSVDTVKSWEQGRRNPTGLASKVLNLL
SKEPELYSKFSD

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10389; Mature: 10258

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIADDIIKSLEQAVEIKKGNLEGNVTRYEIADVKAIREQLHVTQKELAMAIDVSVDTV
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KSWEQGRRNPTGLASKVLNLLSKEPELYSKFSD
HHHHHCCCCCCHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure 
SSIADDIIKSLEQAVEIKKGNLEGNVTRYEIADVKAIREQLHVTQKELAMAIDVSVDTV
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KSWEQGRRNPTGLASKVLNLLSKEPELYSKFSD
HHHHHCCCCCCHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA