Click here to switch to the map view.

The map label for this gene is 59712029

Identifier: 59712029

GI number: 59712029

Start: 1574365

End: 1575435

Strand: Reverse

Name: 59712029

Synonym: VF_1422

Alternate gene names: NA

Gene position: 1575435-1574365 (Counterclockwise)

Preceding gene: 59712030

Following gene: 59712028

Centisome position: 54.37

GC content: 40.8

Gene sequence:

>1071_bases
ATGCCGTTTGATCAACTTGAATTAGCAAATCCATATTGGTTATGGATGCTTCCTTTACCACTGATAATATATTGGTTTAT
ACCTGCATATCGAACACGTCAATCAGCGATTAAAGTGCCATTTTTTGATGTATTGGTTAAAGCTTTAGATGAGGAACCAT
CAGAAGGTGCGAGTCAATTAAGTGCAAGTTTATGGCAAAAAGCATTTTTGGTTGTGTCGTGGTGTCTGCTTATTTTTGCT
TTAACAAAGCCTACGATATTAGGAGAGCCACAAACCCGTGAAAGTTTAGGTCGTGATGTCATGGTTGTGGTGGATTTATC
TGGTTCAATGGCTGAGCAAGATTTTGTCTCTAAACAATCGTCAGATTTAGGCGCAGTAAAGAAGATTTCACGTCTAGAAG
CAACAAAGGAAGTATTAGCCGATTTTGTTAAGACACGTAAAGGGGATCGTTTAGGACTTATTTTATTTGGCGATGCCGCC
TTTGTACAAACGCCATTCACGGCTGATCAATCCGTTTGGCTTGAATTGTTGAATCAAACAGACGTTGCAATGGCAGGGCA
AAGTACCCATCTAGGTGACGCTATCGGCCTTGCGATTAAAGTGTTTGAGCAGAGCAGCGAAGATAAAGCGTCAGCAGAAG
AAAATGCAAAACCACGAGAAAAAGTCGCAATTGTTTTAACGGATGGTAACGACACTGGCAGTTATGTTGAACCTATTGAT
GCCGCAAAAGTTGCAGCAGCGAAAGACGTGCGTATACATATGATTGCAATGGGTGATCCTCGAACTGTGGGTGAGCAAGC
ATTGGATATGAACATCATTAATCGTGTTGCTAAAGAGTCTGGAGGTAAAGCATTCCAGGCGATTAACCGTGATGAATTAG
AACAAGCTTATGATGAAATTGGTGAGTTAGAGCCTCAGCTTTATGAAAGTACGACTTACCGACCAAAGCAGTCAATTCAC
CAATACCCAGCAATGCTAATTGTTGCGATGTATTTGTTTGCCTTTGGTTTCGCCACTATTAGACGTCATTTTTCATCTTC
TTCAAAAAAAGCAGGAGAAAAGCATGTTTGA

Upstream 100 bases:

>100_bases
GAACAAGAAATTGCAGCCTTATTTGCGTTGTGTATCGATTGGTTAGAAAGTCATAAAGATATAAAAACGGCGAGCCAAGA
TATTAAAAAAGGAGAGGATT

Downstream 100 bases:

>100_bases
TCTTCTGATGTGGCAACAAATTGTCAATGAATTTCATTTTATTCGTCCACTATGGCTATTGGCCTTGATTCCATTAAGTA
TTGTTATTTATTTACGTTGG

Product: von Willebrand factor type A domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MPFDQLELANPYWLWMLPLPLIIYWFIPAYRTRQSAIKVPFFDVLVKALDEEPSEGASQLSASLWQKAFLVVSWCLLIFA
LTKPTILGEPQTRESLGRDVMVVVDLSGSMAEQDFVSKQSSDLGAVKKISRLEATKEVLADFVKTRKGDRLGLILFGDAA
FVQTPFTADQSVWLELLNQTDVAMAGQSTHLGDAIGLAIKVFEQSSEDKASAEENAKPREKVAIVLTDGNDTGSYVEPID
AAKVAAAKDVRIHMIAMGDPRTVGEQALDMNIINRVAKESGGKAFQAINRDELEQAYDEIGELEPQLYESTTYRPKQSIH
QYPAMLIVAMYLFAFGFATIRRHFSSSSKKAGEKHV

Sequences:

>Translated_356_residues
MPFDQLELANPYWLWMLPLPLIIYWFIPAYRTRQSAIKVPFFDVLVKALDEEPSEGASQLSASLWQKAFLVVSWCLLIFA
LTKPTILGEPQTRESLGRDVMVVVDLSGSMAEQDFVSKQSSDLGAVKKISRLEATKEVLADFVKTRKGDRLGLILFGDAA
FVQTPFTADQSVWLELLNQTDVAMAGQSTHLGDAIGLAIKVFEQSSEDKASAEENAKPREKVAIVLTDGNDTGSYVEPID
AAKVAAAKDVRIHMIAMGDPRTVGEQALDMNIINRVAKESGGKAFQAINRDELEQAYDEIGELEPQLYESTTYRPKQSIH
QYPAMLIVAMYLFAFGFATIRRHFSSSSKKAGEKHV
>Mature_355_residues
PFDQLELANPYWLWMLPLPLIIYWFIPAYRTRQSAIKVPFFDVLVKALDEEPSEGASQLSASLWQKAFLVVSWCLLIFAL
TKPTILGEPQTRESLGRDVMVVVDLSGSMAEQDFVSKQSSDLGAVKKISRLEATKEVLADFVKTRKGDRLGLILFGDAAF
VQTPFTADQSVWLELLNQTDVAMAGQSTHLGDAIGLAIKVFEQSSEDKASAEENAKPREKVAIVLTDGNDTGSYVEPIDA
AKVAAAKDVRIHMIAMGDPRTVGEQALDMNIINRVAKESGGKAFQAINRDELEQAYDEIGELEPQLYESTTYRPKQSIHQ
YPAMLIVAMYLFAFGFATIRRHFSSSSKKAGEKHV

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 39498; Mature: 39366

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFDQLELANPYWLWMLPLPLIIYWFIPAYRTRQSAIKVPFFDVLVKALDEEPSEGASQL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHH
SASLWQKAFLVVSWCLLIFALTKPTILGEPQTRESLGRDVMVVVDLSGSMAEQDFVSKQS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHCC
SDLGAVKKISRLEATKEVLADFVKTRKGDRLGLILFGDAAFVQTPFTADQSVWLELLNQT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHEECCCCCCHHHHHHHHCCC
DVAMAGQSTHLGDAIGLAIKVFEQSSEDKASAEENAKPREKVAIVLTDGNDTGSYVEPID
CHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCHHCCCCCCCEEEEEEECCCCCCCCCCCCH
AAKVAAAKDVRIHMIAMGDPRTVGEQALDMNIINRVAKESGGKAFQAINRDELEQAYDEI
HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH
GELEPQLYESTTYRPKQSIHQYPAMLIVAMYLFAFGFATIRRHFSSSSKKAGEKHV
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure 
PFDQLELANPYWLWMLPLPLIIYWFIPAYRTRQSAIKVPFFDVLVKALDEEPSEGASQL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHH
SASLWQKAFLVVSWCLLIFALTKPTILGEPQTRESLGRDVMVVVDLSGSMAEQDFVSKQS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHCC
SDLGAVKKISRLEATKEVLADFVKTRKGDRLGLILFGDAAFVQTPFTADQSVWLELLNQT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHEECCCCCCHHHHHHHHCCC
DVAMAGQSTHLGDAIGLAIKVFEQSSEDKASAEENAKPREKVAIVLTDGNDTGSYVEPID
CHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCHHCCCCCCCEEEEEEECCCCCCCCCCCCH
AAKVAAAKDVRIHMIAMGDPRTVGEQALDMNIINRVAKESGGKAFQAINRDELEQAYDEI
HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH
GELEPQLYESTTYRPKQSIHQYPAMLIVAMYLFAFGFATIRRHFSSSSKKAGEKHV
HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]