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The map label for this gene is 59712028

Identifier: 59712028

GI number: 59712028

Start: 1572675

End: 1574372

Strand: Reverse

Name: 59712028

Synonym: VF_1421

Alternate gene names: NA

Gene position: 1574372-1572675 (Counterclockwise)

Preceding gene: 59712029

Following gene: 59712027

Centisome position: 54.33

GC content: 40.22

Gene sequence:

>1698_bases
ATGTTTGATCTTCTGATGTGGCAACAAATTGTCAATGAATTTCATTTTATTCGTCCACTATGGCTATTGGCCTTGATTCC
ATTAAGTATTGTTATTTATTTACGTTGGAAACAAGACAGTAAAAATGAGTGGCAACAAGAATTACCAAAACACCTTCGTT
CAGTGCTAACGGTCAATGATGTTGGTTGGAAAAAACAACTACCACTAAAATTATTGGCTGCTTCTATGCTCGTAGCCATT
GTGGTTTGTGCTGGTCCTACATGGGAGCGTGAGGCTTCGCCATTTGGTGAAGATAAAGCCGCATTGCTTATTGTATTAGA
TAATAGTGAATCCATGTTGCAAAAAGATCTAGCTCCGAATCGATTAGAGCGCTCTAAGCAAAAAATTCGAGATTTGATTG
CATTACGTAAAGGTGGGAAAACAGGGCTTGTTGTCTTTTCGGGAACTTCACACTTGGCTATGCCGTTAACCAAAGATAAC
TCCGTTTTTGCGCCATTCTTAGCAGCGATTCAGCCAGATATCATGCCTATAGAAGGGAAGAATGCAGAAAGTGCATTACC
ACTCATTGAGCCTCAATTAGGGACAGAGAGTGCGGGAACCGTGTTATTAATTACGGATGGCGCTAACCCTGAAACCATCG
CGGCTTATGAGAAATACTTTTCTAAGAGTCGTCATCAGCTGCTTGTGCTTGCTGCCGGCAATGAAAACAGAGCGAGTGAG
AATCCGATGGATTATGCCTCATTAAAAAAATTAGCAAGTAAAAGTGGTGGAAGCGTTATAAGCGTTACTGTGGATGATAG
CGATGTTCGTAGCTTAAACAGTAGAGTCGAGCGACATATGCAATTAAATAATGAATCAGCTATGCCGTGGAAAGACATGG
GTTACTACCTACTATTTCCTGTTTCATTACTTATGTTGTCATGGTTCAGAAAGGGGTGGTTAGTGAAATGGTGCCTCGTG
GTGGTATTGGTTTCCCCTACATTTTATTCAGTGCCAACGTATGCAGAAACCGTAAGTTTAAAAGCGAAAACTCAAGAACC
TGTTAAAGAAGTGACTTTATGGGAAAAAACGACAGATTGGTGGATGGATTTGTGGTTAACCCCCGATCAACAAGGGCAAT
GGTATTTTGATAAATCAGAATATTTAAAAGCAGCAAAAAGTTATCAAGACCCATTAATGAAGGGTACTGCGTATTATTAT
GCAGGTGAGTATAAGTTAGCTCACAGTGCTTTTATTGCTGTGAAATCTGATTTAGGAATGTTTAATGCTGCAAATGCGTT
GGCTCGACAAAGAGAATATGTTGCTGCGAGAAACATCTATCGTATGTTGTTAAAGAAAGATCTCGATCCTGATTTAAAAG
AAAAAACGCAGAATAACTTAAACGTCATGCAAGGCATTGTTGATGAGGTCAATCGGATGAGTGAAAGCCAAAAAGGCACG
ACCGATGGCCCAGAAGAGTCATTTGAACTGGGTGATGATAAGCCTAGAACCGGTGATGGTGCAGATGAAGAAGTGGACTC
TTCTTTAATGACGAAAGAAAGTTTAAATGCAAATGAGATCTTAGGAAGCCAAGAGTTGGCGGACAAATGGCTTCGTCGTG
TTGAGGCTGACCCAAAATATTTCTTGCGTGCCAAGTTCCAATTACAACTTCGTGAACAAACAAGTAATACACAAATGCAA
AATGAAGAGGTGAAATAA

Upstream 100 bases:

>100_bases
TACCCAGCAATGCTAATTGTTGCGATGTATTTGTTTGCCTTTGGTTTCGCCACTATTAGACGTCATTTTTCATCTTCTTC
AAAAAAAGCAGGAGAAAAGC

Downstream 100 bases:

>100_bases
TGTCTCAGCATAATGATAAACGACGTTTAATACACCTTCTTGTATTTATGATAGTACTGCTTATTACGGTAAGTTTCAGT
GCAAGATCCAATGCAGCGAA

Product: transporter

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Von Willebrand Factor Type A; BatB Protein; TPR Domain Protein; Von Willebrand Factor Type A Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Aerotolerance-Related Membrane Protein; Transmembrane Protein; TPR Domain Protein In Aerotolerance Operon; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Repeat Family; TPR Repeat Protein; Unknwon Proteins; Transmembrane TPR Repeat-Containing Protein; Ssl1 Domain Protein; Batb Protein; Aerotolerance-Related Cytoplasmic Membrane Protein BatB; BatB/BatC Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MFDLLMWQQIVNEFHFIRPLWLLALIPLSIVIYLRWKQDSKNEWQQELPKHLRSVLTVNDVGWKKQLPLKLLAASMLVAI
VVCAGPTWEREASPFGEDKAALLIVLDNSESMLQKDLAPNRLERSKQKIRDLIALRKGGKTGLVVFSGTSHLAMPLTKDN
SVFAPFLAAIQPDIMPIEGKNAESALPLIEPQLGTESAGTVLLITDGANPETIAAYEKYFSKSRHQLLVLAAGNENRASE
NPMDYASLKKLASKSGGSVISVTVDDSDVRSLNSRVERHMQLNNESAMPWKDMGYYLLFPVSLLMLSWFRKGWLVKWCLV
VVLVSPTFYSVPTYAETVSLKAKTQEPVKEVTLWEKTTDWWMDLWLTPDQQGQWYFDKSEYLKAAKSYQDPLMKGTAYYY
AGEYKLAHSAFIAVKSDLGMFNAANALARQREYVAARNIYRMLLKKDLDPDLKEKTQNNLNVMQGIVDEVNRMSESQKGT
TDGPEESFELGDDKPRTGDGADEEVDSSLMTKESLNANEILGSQELADKWLRRVEADPKYFLRAKFQLQLREQTSNTQMQ
NEEVK

Sequences:

>Translated_565_residues
MFDLLMWQQIVNEFHFIRPLWLLALIPLSIVIYLRWKQDSKNEWQQELPKHLRSVLTVNDVGWKKQLPLKLLAASMLVAI
VVCAGPTWEREASPFGEDKAALLIVLDNSESMLQKDLAPNRLERSKQKIRDLIALRKGGKTGLVVFSGTSHLAMPLTKDN
SVFAPFLAAIQPDIMPIEGKNAESALPLIEPQLGTESAGTVLLITDGANPETIAAYEKYFSKSRHQLLVLAAGNENRASE
NPMDYASLKKLASKSGGSVISVTVDDSDVRSLNSRVERHMQLNNESAMPWKDMGYYLLFPVSLLMLSWFRKGWLVKWCLV
VVLVSPTFYSVPTYAETVSLKAKTQEPVKEVTLWEKTTDWWMDLWLTPDQQGQWYFDKSEYLKAAKSYQDPLMKGTAYYY
AGEYKLAHSAFIAVKSDLGMFNAANALARQREYVAARNIYRMLLKKDLDPDLKEKTQNNLNVMQGIVDEVNRMSESQKGT
TDGPEESFELGDDKPRTGDGADEEVDSSLMTKESLNANEILGSQELADKWLRRVEADPKYFLRAKFQLQLREQTSNTQMQ
NEEVK
>Mature_565_residues
MFDLLMWQQIVNEFHFIRPLWLLALIPLSIVIYLRWKQDSKNEWQQELPKHLRSVLTVNDVGWKKQLPLKLLAASMLVAI
VVCAGPTWEREASPFGEDKAALLIVLDNSESMLQKDLAPNRLERSKQKIRDLIALRKGGKTGLVVFSGTSHLAMPLTKDN
SVFAPFLAAIQPDIMPIEGKNAESALPLIEPQLGTESAGTVLLITDGANPETIAAYEKYFSKSRHQLLVLAAGNENRASE
NPMDYASLKKLASKSGGSVISVTVDDSDVRSLNSRVERHMQLNNESAMPWKDMGYYLLFPVSLLMLSWFRKGWLVKWCLV
VVLVSPTFYSVPTYAETVSLKAKTQEPVKEVTLWEKTTDWWMDLWLTPDQQGQWYFDKSEYLKAAKSYQDPLMKGTAYYY
AGEYKLAHSAFIAVKSDLGMFNAANALARQREYVAARNIYRMLLKKDLDPDLKEKTQNNLNVMQGIVDEVNRMSESQKGT
TDGPEESFELGDDKPRTGDGADEEVDSSLMTKESLNANEILGSQELADKWLRRVEADPKYFLRAKFQLQLREQTSNTQMQ
NEEVK

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64080; Mature: 64080

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLLMWQQIVNEFHFIRPLWLLALIPLSIVIYLRWKQDSKNEWQQELPKHLRSVLTVND
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
VGWKKQLPLKLLAASMLVAIVVCAGPTWEREASPFGEDKAALLIVLDNSESMLQKDLAPN
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCHH
RLERSKQKIRDLIALRKGGKTGLVVFSGTSHLAMPLTKDNSVFAPFLAAIQPDIMPIEGK
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCEECCCC
NAESALPLIEPQLGTESAGTVLLITDGANPETIAAYEKYFSKSRHQLLVLAAGNENRASE
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
NPMDYASLKKLASKSGGSVISVTVDDSDVRSLNSRVERHMQLNNESAMPWKDMGYYLLFP
CCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHH
VSLLMLSWFRKGWLVKWCLVVVLVSPTFYSVPTYAETVSLKAKTQEPVKEVTLWEKTTDW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCHHHHHHHHHHCCCCCC
WMDLWLTPDQQGQWYFDKSEYLKAAKSYQDPLMKGTAYYYAGEYKLAHSAFIAVKSDLGM
EEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHCCCEEEEECCEEEHHHEEEEECCCCCC
FNAANALARQREYVAARNIYRMLLKKDLDPDLKEKTQNNLNVMQGIVDEVNRMSESQKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCC
TDGPEESFELGDDKPRTGDGADEEVDSSLMTKESLNANEILGSQELADKWLRRVEADPKY
CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCC
FLRAKFQLQLREQTSNTQMQNEEVK
EEEEHHHEEEHHHCCCCCCCCCCCC
>Mature Secondary Structure
MFDLLMWQQIVNEFHFIRPLWLLALIPLSIVIYLRWKQDSKNEWQQELPKHLRSVLTVND
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
VGWKKQLPLKLLAASMLVAIVVCAGPTWEREASPFGEDKAALLIVLDNSESMLQKDLAPN
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCHH
RLERSKQKIRDLIALRKGGKTGLVVFSGTSHLAMPLTKDNSVFAPFLAAIQPDIMPIEGK
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCEECCCC
NAESALPLIEPQLGTESAGTVLLITDGANPETIAAYEKYFSKSRHQLLVLAAGNENRASE
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
NPMDYASLKKLASKSGGSVISVTVDDSDVRSLNSRVERHMQLNNESAMPWKDMGYYLLFP
CCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHH
VSLLMLSWFRKGWLVKWCLVVVLVSPTFYSVPTYAETVSLKAKTQEPVKEVTLWEKTTDW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCHHHHHHHHHHCCCCCC
WMDLWLTPDQQGQWYFDKSEYLKAAKSYQDPLMKGTAYYYAGEYKLAHSAFIAVKSDLGM
EEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHCCCEEEEECCEEEHHHEEEEECCCCCC
FNAANALARQREYVAARNIYRMLLKKDLDPDLKEKTQNNLNVMQGIVDEVNRMSESQKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCC
TDGPEESFELGDDKPRTGDGADEEVDSSLMTKESLNANEILGSQELADKWLRRVEADPKY
CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCC
FLRAKFQLQLREQTSNTQMQNEEVK
EEEEHHHEEEHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA