| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711991
Identifier: 59711991
GI number: 59711991
Start: 1532784
End: 1533428
Strand: Direct
Name: 59711991
Synonym: VF_1384
Alternate gene names: NA
Gene position: 1532784-1533428 (Clockwise)
Preceding gene: 59711985
Following gene: 59711997
Centisome position: 52.9
GC content: 39.84
Gene sequence:
>645_bases ATGACTATTCCTATTCTCTACTCATTACGACAGTGCCCATACGCAATGCGTGCACGCTTAGCCATTCTGTATGCAGGACA AACTGTTGTGCTACGAGATGTAGACATGATGAATAAACCAAAAGAAATGTTATCCATTTCCCCTAAAGGCACGGTACCTG TACTTCATTTTGAAGATACGGTTATTGAAGAAAGTGTTGATGTGATGCTTTGGACACTAACCCAATCCGACCCAAGAAAC TTACTATACCATCATGATTTGCTTCAGCTTCCATTGATGTTGGATCTCATTCAAAAAAGTGACTCTGAATTTGTGCAAAT TTTACAAAAATACAGGGCTGCTTCTCGCTATCATGACGATAATGAAATGGAGTATAGGGATAAGTGTGTCGAATGGTTAT CAGACATTGAAGAGCGATTATCTAAACATACATTTATCATGGGGGAAAGTGCCAGTATCGTTGATTACGCGCTTTTGCCT TTTATTCGCCAATTCTCTCGAGTAGATAAGAAATGGTACAACATCGCTCCTTTGCCACATTTAAGAGCTTGGCTTGTTCG CCATTATAACGACCCTATTTTCTCTAAAGCCATGACAATCTACCCTAAATGGAACCGTGATGCTGAACCTGTCATTTTCG GTTAA
Upstream 100 bases:
>100_bases ACCAGAAGTAAGGGTTTTTATTGATCCAGATCATGAGGTATAACTATGATTTTCATTAGCAATGACACATATTCGACTTC ATTCAAAGTTTAAGGTAACG
Downstream 100 bases:
>100_bases GATTCCCCCATATAACCACTGAAACAAAGAGAGCGCTCCATCTCAACAAAATGCTCATCTTCTCTGACAATTTGATAGCC TAACGAAAGATAAAAATTGA
Product: putative glutathione S-transferase
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase N Terminus; Glutathione S-Transferase N-Terminal Domain; Glutaredoxin; Glutathione-S-Transferase Domain-Containing Protein; Rhodanese Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Family Protein; Glutathione S-Transferase C-Terminal-Like Domain; Glutathione S-Transferase Domain; Glutathione-S-Transferase Domain Protein; Glutathione S-Transferase Omega Class; Rhodanese Domain-Containing Protein; Glutathione S-Transferase N-Terminal Domain Protein; Stringent Starvation Protein A; Glutathione S-Transferase N Terminal Domain Protein; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase C-Terminal Domain Protein
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTIPILYSLRQCPYAMRARLAILYAGQTVVLRDVDMMNKPKEMLSISPKGTVPVLHFEDTVIEESVDVMLWTLTQSDPRN LLYHHDLLQLPLMLDLIQKSDSEFVQILQKYRAASRYHDDNEMEYRDKCVEWLSDIEERLSKHTFIMGESASIVDYALLP FIRQFSRVDKKWYNIAPLPHLRAWLVRHYNDPIFSKAMTIYPKWNRDAEPVIFG
Sequences:
>Translated_214_residues MTIPILYSLRQCPYAMRARLAILYAGQTVVLRDVDMMNKPKEMLSISPKGTVPVLHFEDTVIEESVDVMLWTLTQSDPRN LLYHHDLLQLPLMLDLIQKSDSEFVQILQKYRAASRYHDDNEMEYRDKCVEWLSDIEERLSKHTFIMGESASIVDYALLP FIRQFSRVDKKWYNIAPLPHLRAWLVRHYNDPIFSKAMTIYPKWNRDAEPVIFG >Mature_213_residues TIPILYSLRQCPYAMRARLAILYAGQTVVLRDVDMMNKPKEMLSISPKGTVPVLHFEDTVIEESVDVMLWTLTQSDPRNL LYHHDLLQLPLMLDLIQKSDSEFVQILQKYRAASRYHDDNEMEYRDKCVEWLSDIEERLSKHTFIMGESASIVDYALLPF IRQFSRVDKKWYNIAPLPHLRAWLVRHYNDPIFSKAMTIYPKWNRDAEPVIFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25236; Mature: 25104
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPILYSLRQCPYAMRARLAILYAGQTVVLRDVDMMNKPKEMLSISPKGTVPVLHFEDT CCCHHHHHHHHCCHHHHHHHHEEECCCEEEEECCHHHCCCHHHHCCCCCCCEEEEECCHH VIEESVDVMLWTLTQSDPRNLLYHHDLLQLPLMLDLIQKSDSEFVQILQKYRAASRYHDD HHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC NEMEYRDKCVEWLSDIEERLSKHTFIMGESASIVDYALLPFIRQFSRVDKKWYNIAPLPH CCHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LRAWLVRHYNDPIFSKAMTIYPKWNRDAEPVIFG HHHHHHHHCCCHHHHHHEEEEECCCCCCCCEECC >Mature Secondary Structure TIPILYSLRQCPYAMRARLAILYAGQTVVLRDVDMMNKPKEMLSISPKGTVPVLHFEDT CCHHHHHHHHCCHHHHHHHHEEECCCEEEEECCHHHCCCHHHHCCCCCCCEEEEECCHH VIEESVDVMLWTLTQSDPRNLLYHHDLLQLPLMLDLIQKSDSEFVQILQKYRAASRYHDD HHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC NEMEYRDKCVEWLSDIEERLSKHTFIMGESASIVDYALLPFIRQFSRVDKKWYNIAPLPH CCHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LRAWLVRHYNDPIFSKAMTIYPKWNRDAEPVIFG HHHHHHHHCCCHHHHHHEEEEECCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA