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The map label for this gene is ycsG [H]

Identifier: 59711980

GI number: 59711980

Start: 1519488

End: 1520732

Strand: Reverse

Name: ycsG [H]

Synonym: VF_1373

Alternate gene names: 59711980

Gene position: 1520732-1519488 (Counterclockwise)

Preceding gene: 59711981

Following gene: 59711979

Centisome position: 52.48

GC content: 41.37

Gene sequence:

>1245_bases
ATGTCATCAGAAAAAGTCATGAGTGAGTCGTCAAATGCGTCCACAAAGGAAGGACAGCTGCCGAGAAGTTCAGGTGTTAG
TTGGTCATTGATAATGGGCGCTGCCTTTTTGATGGCAACCTCAGCAGTTGGTCCCGGTTTTTTAACTCAAACAACAGTAT
TTACACAAACATTAGGGGCTAGTTTTGCGTTTGTTATTCTGGTTTCTATTATTTTAGATATTGGTGCTCAATTAAATATT
TGGCGTGTAATCGTTGTTTCCAAAAAGCGCGCTCAGGATATAGCAAATGATTTACTTCCCGGTTTAGGTTATGCAATTGC
AGGAACCGTAGCTTTAGGTGGGTTAGCATTTAATATCGGAAACATTGGTGGTGCAGGGATGGGGATGAACGTGTTATTCC
CGAGCATTTCTCCGGTAGCAGGGGCCTCAATCAGTGCCGTTATTGCTGTGGCCATTTTTATGTTAAAAGATGCAGCTAAA
GTAATGGACCGTTTTACTATTTTAATGGGTGCCGCATTAATAGTAATGACTCTATATGTTCTTTTCTCAACGTCTCCACC
AATTGGAGAGGCATTGTATCGTTCAGTTTGGCCTGAAAAATTAAACGTTCTTGCAATCATCACGCTAGTTGGTGGTACGG
TTGGTGGCTATATTACTTTTGCAGGGGCACACCGCTTAATTGATGCTGGAGTAACAGGAAAAGAAGCGCTGCCACAAGTG
AATCGAGGCTCAGTTTCTGCGATTAGCGTAGCTTCAATCGTGCGTGTTATTTTGTTTTTAGCGGCGTTAGGGGTAATAAG
TACAGGGGTAACTTTGGACCCTTCAAACCCGCCTGCATCTATGTTCCAACACGCTGCCGGAAACATAGGTTATAAAATTT
TCGGTTTAGTTCTTTGGGCTGCGGCCATTACTTCCGTTATCGGTGCTGCATATACATCCGTATCGTTTTTGAAGACATTG
CATCCGATGATTGATTTGCACTCTCGTAAATTTATTATTGGTTTTATTGTTATCTCTACTTTTATCTTCTGCTTTATCGG
TAAGCCTGTTGTTCTTCTAATTGTTGCTGGTGCTCTAAACGGATTCATTCTACCTGTTACCTTAGGCATTATGTTAATAG
CGGCAAAGAAAGCACAAATTGTTGGAGATTATAAGCACCCAGTATGGATGTCGGTGTTTGGGTGGTTAATTACAGCAATG
ATGGCTGCAATGAGTGTATATACCTTATACATGTTGCTTATTTAA

Upstream 100 bases:

>100_bases
TACTTCTTATAACTCTTAATAATTCTAATAAATATCGTCGATAGACGAGAAACTACTGCAACAATAAGGATGCAGTGACG
TGATAACAAAAGGAAATGAT

Downstream 100 bases:

>100_bases
CCGATGAGGCACATTTTCTTAAATATTTAGCACAAATTAATAATAAAAAATATTTAAAAACTTCTCATCTACTTATTTTT
GAATATACTCGTTAAATGCC

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSSEKVMSESSNASTKEGQLPRSSGVSWSLIMGAAFLMATSAVGPGFLTQTTVFTQTLGASFAFVILVSIILDIGAQLNI
WRVIVVSKKRAQDIANDLLPGLGYAIAGTVALGGLAFNIGNIGGAGMGMNVLFPSISPVAGASISAVIAVAIFMLKDAAK
VMDRFTILMGAALIVMTLYVLFSTSPPIGEALYRSVWPEKLNVLAIITLVGGTVGGYITFAGAHRLIDAGVTGKEALPQV
NRGSVSAISVASIVRVILFLAALGVISTGVTLDPSNPPASMFQHAAGNIGYKIFGLVLWAAAITSVIGAAYTSVSFLKTL
HPMIDLHSRKFIIGFIVISTFIFCFIGKPVVLLIVAGALNGFILPVTLGIMLIAAKKAQIVGDYKHPVWMSVFGWLITAM
MAAMSVYTLYMLLI

Sequences:

>Translated_414_residues
MSSEKVMSESSNASTKEGQLPRSSGVSWSLIMGAAFLMATSAVGPGFLTQTTVFTQTLGASFAFVILVSIILDIGAQLNI
WRVIVVSKKRAQDIANDLLPGLGYAIAGTVALGGLAFNIGNIGGAGMGMNVLFPSISPVAGASISAVIAVAIFMLKDAAK
VMDRFTILMGAALIVMTLYVLFSTSPPIGEALYRSVWPEKLNVLAIITLVGGTVGGYITFAGAHRLIDAGVTGKEALPQV
NRGSVSAISVASIVRVILFLAALGVISTGVTLDPSNPPASMFQHAAGNIGYKIFGLVLWAAAITSVIGAAYTSVSFLKTL
HPMIDLHSRKFIIGFIVISTFIFCFIGKPVVLLIVAGALNGFILPVTLGIMLIAAKKAQIVGDYKHPVWMSVFGWLITAM
MAAMSVYTLYMLLI
>Mature_413_residues
SSEKVMSESSNASTKEGQLPRSSGVSWSLIMGAAFLMATSAVGPGFLTQTTVFTQTLGASFAFVILVSIILDIGAQLNIW
RVIVVSKKRAQDIANDLLPGLGYAIAGTVALGGLAFNIGNIGGAGMGMNVLFPSISPVAGASISAVIAVAIFMLKDAAKV
MDRFTILMGAALIVMTLYVLFSTSPPIGEALYRSVWPEKLNVLAIITLVGGTVGGYITFAGAHRLIDAGVTGKEALPQVN
RGSVSAISVASIVRVILFLAALGVISTGVTLDPSNPPASMFQHAAGNIGYKIFGLVLWAAAITSVIGAAYTSVSFLKTLH
PMIDLHSRKFIIGFIVISTFIFCFIGKPVVLLIVAGALNGFILPVTLGIMLIAAKKAQIVGDYKHPVWMSVFGWLITAMM
AAMSVYTLYMLLI

Specific function: Unknown

COG id: COG1914

COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NRAMP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001046 [H]

Pfam domain/function: PF01566 Nramp [H]

EC number: NA

Molecular weight: Translated: 43355; Mature: 43224

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEKVMSESSNASTKEGQLPRSSGVSWSLIMGAAFLMATSAVGPGFLTQTTVFTQTLGA
CCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SFAFVILVSIILDIGAQLNIWRVIVVSKKRAQDIANDLLPGLGYAIAGTVALGGLAFNIG
HHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
NIGGAGMGMNVLFPSISPVAGASISAVIAVAIFMLKDAAKVMDRFTILMGAALIVMTLYV
CCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSTSPPIGEALYRSVWPEKLNVLAIITLVGGTVGGYITFAGAHRLIDAGVTGKEALPQV
HHCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHCCCCCHHHCCCC
NRGSVSAISVASIVRVILFLAALGVISTGVTLDPSNPPASMFQHAAGNIGYKIFGLVLWA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCHHHHHHHHHHH
AAITSVIGAAYTSVSFLKTLHPMIDLHSRKFIIGFIVISTFIFCFIGKPVVLLIVAGALN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GFILPVTLGIMLIAAKKAQIVGDYKHPVWMSVFGWLITAMMAAMSVYTLYMLLI
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SSEKVMSESSNASTKEGQLPRSSGVSWSLIMGAAFLMATSAVGPGFLTQTTVFTQTLGA
CCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SFAFVILVSIILDIGAQLNIWRVIVVSKKRAQDIANDLLPGLGYAIAGTVALGGLAFNIG
HHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
NIGGAGMGMNVLFPSISPVAGASISAVIAVAIFMLKDAAKVMDRFTILMGAALIVMTLYV
CCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSTSPPIGEALYRSVWPEKLNVLAIITLVGGTVGGYITFAGAHRLIDAGVTGKEALPQV
HHCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHCCCCCHHHCCCC
NRGSVSAISVASIVRVILFLAALGVISTGVTLDPSNPPASMFQHAAGNIGYKIFGLVLWA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCHHHHHHHHHHH
AAITSVIGAAYTSVSFLKTLHPMIDLHSRKFIIGFIVISTFIFCFIGKPVVLLIVAGALN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GFILPVTLGIMLIAAKKAQIVGDYKHPVWMSVFGWLITAMMAAMSVYTLYMLLI
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 8969502 [H]