| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711895
Identifier: 59711895
GI number: 59711895
Start: 1438332
End: 1438574
Strand: Direct
Name: 59711895
Synonym: VF_1288
Alternate gene names: NA
Gene position: 1438332-1438574 (Clockwise)
Preceding gene: 228873813
Following gene: 59711896
Centisome position: 49.64
GC content: 42.39
Gene sequence:
>243_bases ATGATCACTCTCTATAGCACGGAAGGCTGCCACCTTTGCGAGCAAGCGTTTGACTTGCTTGTCGAGGTGGGTGTAGATAT GGAACAAGTAGATACCGTCGATATTGCATTTAACGATGAGCTTTTCTCTCGTTACGGTGTCACTATTCCTGTAGTGGCGA ATGGCTTATCTGAGCTAAATTGGCCCTTTGATGCATCACAACTAAAGAATTGGTTAGAAGATAATGGCATTACTTACAAT TAA
Upstream 100 bases:
>100_bases AGCGAAGAATATTTCTAAGCAAACTTTGCCTCTTGATTTTGCTCGTAACAAGCATATCCATAACTGTTGGATTATTACCC ACAAGGAAGACTAAGAGATA
Downstream 100 bases:
>100_bases TAACGGACAACTGGCCTTTGGCGATCATCCGTTATTAGATAAATCTGATTTCGCTTTACAAGAAAATGAGCGTGTTTGTT TGGTTGGTCGCAATGGTGCG
Product: glutaredoxin-like domain-containing protein
Products: NA
Alternate protein names: Glutaredoxin-Like Domain-Containing Protein; Glutaredoxin Domain Family Protein
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MITLYSTEGCHLCEQAFDLLVEVGVDMEQVDTVDIAFNDELFSRYGVTIPVVANGLSELNWPFDASQLKNWLEDNGITYN
Sequences:
>Translated_80_residues MITLYSTEGCHLCEQAFDLLVEVGVDMEQVDTVDIAFNDELFSRYGVTIPVVANGLSELNWPFDASQLKNWLEDNGITYN >Mature_80_residues MITLYSTEGCHLCEQAFDLLVEVGVDMEQVDTVDIAFNDELFSRYGVTIPVVANGLSELNWPFDASQLKNWLEDNGITYN
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9019; Mature: 9019
Theoretical pI: Translated: 3.52; Mature: 3.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLYSTEGCHLCEQAFDLLVEVGVDMEQVDTVDIAFNDELFSRYGVTIPVVANGLSELN CEEEECCCCCHHHHHHHHHHHHHCCCHHHCCEEEEEECHHHHHHHCCCHHHHHCCHHHCC WPFDASQLKNWLEDNGITYN CCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MITLYSTEGCHLCEQAFDLLVEVGVDMEQVDTVDIAFNDELFSRYGVTIPVVANGLSELN CEEEECCCCCHHHHHHHHHHHHHCCCHHHCCEEEEEECHHHHHHHCCCHHHHHCCHHHCC WPFDASQLKNWLEDNGITYN CCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA