Click here to switch to the map view.

The map label for this gene is 59711888

Identifier: 59711888

GI number: 59711888

Start: 1424718

End: 1425461

Strand: Direct

Name: 59711888

Synonym: VF_1281

Alternate gene names: NA

Gene position: 1424718-1425461 (Clockwise)

Preceding gene: 59711887

Following gene: 59711889

Centisome position: 49.17

GC content: 32.93

Gene sequence:

>744_bases
ATGTCTAAAAAACGGCAAATCATTGAATTTACAACTAGGCTTAACATAGTAAGCATTCAATTTACTTGGAGTCTTGATAT
GAAGCCGATGATTTTATCTGTATTACTTTTCTTTATTAGTCCCTTTGTATCTAACGCAACGGTAGAGTTAGAAAATAAAT
CGCTAACGTATTTTGAAAATCCATTTTTATTAGGTGATTGGTACTTCTTTAAACCACCACATATCGAAAATGATTTTGAT
GTTCTTCATATTCGACTCAATTCTGATCATCAATTTACGATTGAAATGATAAAAGTAGAAAAGAATACGGCAGATTCGTG
GTCGGGAGAGTTTCAGTTATCACCAGAGCGAATTTTGTTTAAAGGCGGTGAAGATGAATCTCATGTTTATCACTACCAAG
TTAGTCATAACCGATTGTATTTAAATGGTGTTGAATTCTTTAAAGTTGTCCCTGAAACCTACACTGGAGCCTGGCGTTCA
CAACTGGTTTCTGGTGAAGATATCATGGTAAGTGATGTTCAAAATTTAAATCTATTTTTAGGTTCGGATTTTATTTTTTC
ATTAGAAGTGATTTCGAGTACAGGTAAACGAAATCAAAAAATTGGTTACTATTACTTTGAAGATGATGACTTGGTTCTTT
TATATGATGAAGGGGAGCAGGAATCGACATTTGAAATTAATGAAAATGCACTAGAGTTAAAAAATGAGCAATTTGGAATG
TATGCGCTATTAGTTCGGGATTAA

Upstream 100 bases:

>100_bases
AGCGGTTTCAATTACGATTGATTTAGCACTAATGAATCAGAAAAAGTAATCTCAATTTGAATTATTTTAAAACAGAAGTC
ATGATGGCTTCTGTTTTTTT

Downstream 100 bases:

>100_bases
TGTTACTCCAAGTATAGAAATATGAGACTAGAATATTTTTTAATAACAAATTTGTTGGATCTTATGCGAGAATGTAGGAG
TTAAATAGCTATTATCACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSKKRQIIEFTTRLNIVSIQFTWSLDMKPMILSVLLFFISPFVSNATVELENKSLTYFENPFLLGDWYFFKPPHIENDFD
VLHIRLNSDHQFTIEMIKVEKNTADSWSGEFQLSPERILFKGGEDESHVYHYQVSHNRLYLNGVEFFKVVPETYTGAWRS
QLVSGEDIMVSDVQNLNLFLGSDFIFSLEVISSTGKRNQKIGYYYFEDDDLVLLYDEGEQESTFEINENALELKNEQFGM
YALLVRD

Sequences:

>Translated_247_residues
MSKKRQIIEFTTRLNIVSIQFTWSLDMKPMILSVLLFFISPFVSNATVELENKSLTYFENPFLLGDWYFFKPPHIENDFD
VLHIRLNSDHQFTIEMIKVEKNTADSWSGEFQLSPERILFKGGEDESHVYHYQVSHNRLYLNGVEFFKVVPETYTGAWRS
QLVSGEDIMVSDVQNLNLFLGSDFIFSLEVISSTGKRNQKIGYYYFEDDDLVLLYDEGEQESTFEINENALELKNEQFGM
YALLVRD
>Mature_246_residues
SKKRQIIEFTTRLNIVSIQFTWSLDMKPMILSVLLFFISPFVSNATVELENKSLTYFENPFLLGDWYFFKPPHIENDFDV
LHIRLNSDHQFTIEMIKVEKNTADSWSGEFQLSPERILFKGGEDESHVYHYQVSHNRLYLNGVEFFKVVPETYTGAWRSQ
LVSGEDIMVSDVQNLNLFLGSDFIFSLEVISSTGKRNQKIGYYYFEDDDLVLLYDEGEQESTFEINENALELKNEQFGMY
ALLVRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28947; Mature: 28816

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKRQIIEFTTRLNIVSIQFTWSLDMKPMILSVLLFFISPFVSNATVELENKSLTYFEN
CCCCCEEEEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEECC
PFLLGDWYFFKPPHIENDFDVLHIRLNSDHQFTIEMIKVEKNTADSWSGEFQLSPERILF
CEEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCEEEECCCEEEE
KGGEDESHVYHYQVSHNRLYLNGVEFFKVVPETYTGAWRSQLVSGEDIMVSDVQNLNLFL
ECCCCCCEEEEEEEECCEEEEECEEEEEECCCHHCCHHHHHHCCCCCEEEECCCCCEEEE
GSDFIFSLEVISSTGKRNQKIGYYYFEDDDLVLLYDEGEQESTFEINENALELKNEQFGM
CCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCEEEECCCCCCE
YALLVRD
EEEEEEC
>Mature Secondary Structure 
SKKRQIIEFTTRLNIVSIQFTWSLDMKPMILSVLLFFISPFVSNATVELENKSLTYFEN
CCCCEEEEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEECC
PFLLGDWYFFKPPHIENDFDVLHIRLNSDHQFTIEMIKVEKNTADSWSGEFQLSPERILF
CEEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCEEEECCCEEEE
KGGEDESHVYHYQVSHNRLYLNGVEFFKVVPETYTGAWRSQLVSGEDIMVSDVQNLNLFL
ECCCCCCEEEEEEEECCEEEEECEEEEEECCCHHCCHHHHHHCCCCCEEEECCCCCEEEE
GSDFIFSLEVISSTGKRNQKIGYYYFEDDDLVLLYDEGEQESTFEINENALELKNEQFGM
CCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCEEEECCCCCCE
YALLVRD
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA