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The map label for this gene is ydjX [C]

Identifier: 59711870

GI number: 59711870

Start: 1404109

End: 1404795

Strand: Direct

Name: ydjX [C]

Synonym: VF_1263

Alternate gene names: 59711870

Gene position: 1404109-1404795 (Clockwise)

Preceding gene: 59711869

Following gene: 59711871

Centisome position: 48.46

GC content: 37.7

Gene sequence:

>687_bases
ATGAATAAAAAACTGATTTTATTACTTATTCTTTTTGCGTCATTTGCTGCAGTGTATGTCAATTTCGGGCATTTATTGAC
ACTTGAGCAGGTGAAAGCATTCCATCAAAATGTGCAAAATGACATACAAGCGAACCTGTTTGTATACAGTGCCGTTTATT
TTATCTCTTATGTTGTTATTACGGCTCTGTCTATTCCTGGTGCTGCGGTTGTAACTTTGCTTGGCGCGGCATTGTTTGGT
TTTTGGTGGAGTTTATTGTTGGTGTCGTTTGCCAGTACCATTGGAGCAACCATTGCGTTTTTAAGCAGCCGTTATTTATT
AAGAGAGTGGGTAGACAGTAAGTTTAAAGATAAGTTGGTAGCGATTAATGAGGGTGTGGAAAAAGATGGTGCATTCTATT
TGCTGACACTACGCTTGATCCCTGTGTTTCCGTTTTTCTTAATCAATTTACTTATGGGATTAACCAAAATATCAGTAGGT
CGTTTCTATTTGTTTAGTCAGTTAGGTATGTTACCGGGGACAATGGTGTACTTAAATGCGGGTACACAGCTCTCAGAAAT
AACCTCGCTATCTGGGTTAATTTCACCACAAATTTTAGGTTCACTCGCTTTACTTGGTTTGTTTCCAATTATCATTAAAT
TTATTATGGGGCAGATTCAAAAACGTCGCTCTCAAGTAAAAGAGTAA

Upstream 100 bases:

>100_bases
CCTGTGACAGTGCCTCAAATTTGGTTGGATGGTAAATACGTTGGTGGCTTTGATGATTTATCAAAACAGATGAACACTGA
TGTGAAAGCGGGGAATTAAT

Downstream 100 bases:

>100_bases
TCGATAGAGAGACCTATCCCACATTCTTATCTTTTGGTGGGCAGAATCATCTCGTAATCGTTATATTTATCAATTAAATT
AATTAAGAAGAAGCATTCTC

Product: mercuric reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNKKLILLLILFASFAAVYVNFGHLLTLEQVKAFHQNVQNDIQANLFVYSAVYFISYVVITALSIPGAAVVTLLGAALFG
FWWSLLLVSFASTIGATIAFLSSRYLLREWVDSKFKDKLVAINEGVEKDGAFYLLTLRLIPVFPFFLINLLMGLTKISVG
RFYLFSQLGMLPGTMVYLNAGTQLSEITSLSGLISPQILGSLALLGLFPIIIKFIMGQIQKRRSQVKE

Sequences:

>Translated_228_residues
MNKKLILLLILFASFAAVYVNFGHLLTLEQVKAFHQNVQNDIQANLFVYSAVYFISYVVITALSIPGAAVVTLLGAALFG
FWWSLLLVSFASTIGATIAFLSSRYLLREWVDSKFKDKLVAINEGVEKDGAFYLLTLRLIPVFPFFLINLLMGLTKISVG
RFYLFSQLGMLPGTMVYLNAGTQLSEITSLSGLISPQILGSLALLGLFPIIIKFIMGQIQKRRSQVKE
>Mature_228_residues
MNKKLILLLILFASFAAVYVNFGHLLTLEQVKAFHQNVQNDIQANLFVYSAVYFISYVVITALSIPGAAVVTLLGAALFG
FWWSLLLVSFASTIGATIAFLSSRYLLREWVDSKFKDKLVAINEGVEKDGAFYLLTLRLIPVFPFFLINLLMGLTKISVG
RFYLFSQLGMLPGTMVYLNAGTQLSEITSLSGLISPQILGSLALLGLFPIIIKFIMGQIQKRRSQVKE

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Homo sapiens, GI66392190, Length=218, Percent_Identity=27.0642201834862, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI18087813, Length=207, Percent_Identity=27.0531400966184, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI87081964, Length=146, Percent_Identity=30.8219178082192, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1788049, Length=189, Percent_Identity=31.2169312169312, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17532687, Length=228, Percent_Identity=28.9473684210526, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI18859941, Length=216, Percent_Identity=27.3148148148148, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25313; Mature: 25313

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLILLLILFASFAAVYVNFGHLLTLEQVKAFHQNVQNDIQANLFVYSAVYFISYVVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TALSIPGAAVVTLLGAALFGFWWSLLLVSFASTIGATIAFLSSRYLLREWVDSKFKDKLV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AINEGVEKDGAFYLLTLRLIPVFPFFLINLLMGLTKISVGRFYLFSQLGMLPGTMVYLNA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
GTQLSEITSLSGLISPQILGSLALLGLFPIIIKFIMGQIQKRRSQVKE
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKKLILLLILFASFAAVYVNFGHLLTLEQVKAFHQNVQNDIQANLFVYSAVYFISYVVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TALSIPGAAVVTLLGAALFGFWWSLLLVSFASTIGATIAFLSSRYLLREWVDSKFKDKLV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AINEGVEKDGAFYLLTLRLIPVFPFFLINLLMGLTKISVGRFYLFSQLGMLPGTMVYLNA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
GTQLSEITSLSGLISPQILGSLALLGLFPIIIKFIMGQIQKRRSQVKE
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]