| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is tyrP-A [H]
Identifier: 59711779
GI number: 59711779
Start: 1302304
End: 1303470
Strand: Direct
Name: tyrP-A [H]
Synonym: VF_1172
Alternate gene names: 59711779
Gene position: 1302304-1303470 (Clockwise)
Preceding gene: 59711778
Following gene: 59711780
Centisome position: 44.95
GC content: 33.25
Gene sequence:
>1167_bases ATGAATTTTAAATTATTTGGTAGTGCGTTAATTTTATCTGGTACAGCATTAGGCGCAGGGATGCTGGCTATCCCTATGGT ATTGGCACAGTTTGGATTGTTTTATAGCACTCTACTAATGTTGATTATCTGTGCAGGAACAACATACGCAGCTTTGCTAT TAACAGAAGCATGTTCAAAAACAGAATTAGCATTTGGGATTAATACTGTAGCAAATAAGACCATTGGTAAAGGTGGTCAA CTTGTTACTAATGCTCTGTTCTATCTTTTATTATTTTGCATGTTAATTGCTTATATTTTAGGGGCAGCAGATTTAATTAA ACGTATATTTTCTATGATGAATGTAGAAATGAGCATTGAATTTGCTCAGGTTGCATTCACCTTGTTTGCGAGTGCTTTTG TTGTTTGTGGAACACAAATTATTGATAAGCTAAATCGACTGTTGTTTTTCTTTATGATTTCCATGTTGGTGTTGACTTTA ATCATTCTAATTCCAGGTATGACAGTGGAAAATCTATCGCAAGTAACAAACCATGATAAAGGTATGCTATTTGATACCAG CACGATTTTGTTTACTAGCTTTGCCTCTATGCCAGTAATTCCTTCGTTAGTTGCTTATAATAAGGAAGCGACAAAACAAC AATTGCGAAATATGGTTATTCTAGGATCGATCATTCCATTGATCTGTTATTTAGTATGGCTATATGCGGTTGTTGGTAAC TTAACAGCAAATGAAATTACGCATTTTTCTAATATCTCTGATTTGATTCAAACATTCAGTGCGAAGAATGAATATATTGA AATTATTCTGTCGATTTTCACATCATTAGCATTATTGACTTCTTTCCTTGGTGTGGCGATGGCTTTATATAATCAAAATA AAGATATGATTTCACATAATAAGATTGTGACATATGTGTGCACGTTTATTTTGCCTTTATTAGGTGCTGGTTTAGCGGCT GATCAATTCTTATCTGTACTTGGTTATGCTGGTGTTATCTTGGTTTTCTTAGCTATTTTTATTCCATTAGCAATGGTTGT AACGTTAAGAAAAAAAGAGACAGAGGAAGTGCATCAAAACCTTCATATTTATACAGCTGAAGGTGGTAAATTAGCTCTTG GTTTAACTCTTTTATTTGGTTTATTGCTATTAATTAGCCAAATTTAA
Upstream 100 bases:
>100_bases CTTATTTACGGTGTTGTCACATACTATGAATAAGAGCACATCATATCGACAATCTAATTACAGTGTTGATATAAATTTGT TTCAAAAAGAATGATATACA
Downstream 100 bases:
>100_bases TAGATATTATGATCTGACCTGATACAGTTAACGTAATAGTTAAAGAATATTTACTGTAGAAGGTCAGCATTATGAAATAC TTAATTATTGCATTTTCTGC
Product: tyrosine-specific transport protein
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease 1 [H]
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MNFKLFGSALILSGTALGAGMLAIPMVLAQFGLFYSTLLMLIICAGTTYAALLLTEACSKTELAFGINTVANKTIGKGGQ LVTNALFYLLLFCMLIAYILGAADLIKRIFSMMNVEMSIEFAQVAFTLFASAFVVCGTQIIDKLNRLLFFFMISMLVLTL IILIPGMTVENLSQVTNHDKGMLFDTSTILFTSFASMPVIPSLVAYNKEATKQQLRNMVILGSIIPLICYLVWLYAVVGN LTANEITHFSNISDLIQTFSAKNEYIEIILSIFTSLALLTSFLGVAMALYNQNKDMISHNKIVTYVCTFILPLLGAGLAA DQFLSVLGYAGVILVFLAIFIPLAMVVTLRKKETEEVHQNLHIYTAEGGKLALGLTLLFGLLLLISQI
Sequences:
>Translated_388_residues MNFKLFGSALILSGTALGAGMLAIPMVLAQFGLFYSTLLMLIICAGTTYAALLLTEACSKTELAFGINTVANKTIGKGGQ LVTNALFYLLLFCMLIAYILGAADLIKRIFSMMNVEMSIEFAQVAFTLFASAFVVCGTQIIDKLNRLLFFFMISMLVLTL IILIPGMTVENLSQVTNHDKGMLFDTSTILFTSFASMPVIPSLVAYNKEATKQQLRNMVILGSIIPLICYLVWLYAVVGN LTANEITHFSNISDLIQTFSAKNEYIEIILSIFTSLALLTSFLGVAMALYNQNKDMISHNKIVTYVCTFILPLLGAGLAA DQFLSVLGYAGVILVFLAIFIPLAMVVTLRKKETEEVHQNLHIYTAEGGKLALGLTLLFGLLLLISQI >Mature_388_residues MNFKLFGSALILSGTALGAGMLAIPMVLAQFGLFYSTLLMLIICAGTTYAALLLTEACSKTELAFGINTVANKTIGKGGQ LVTNALFYLLLFCMLIAYILGAADLIKRIFSMMNVEMSIEFAQVAFTLFASAFVVCGTQIIDKLNRLLFFFMISMLVLTL IILIPGMTVENLSQVTNHDKGMLFDTSTILFTSFASMPVIPSLVAYNKEATKQQLRNMVILGSIIPLICYLVWLYAVVGN LTANEITHFSNISDLIQTFSAKNEYIEIILSIFTSLALLTSFLGVAMALYNQNKDMISHNKIVTYVCTFILPLLGAGLAA DQFLSVLGYAGVILVFLAIFIPLAMVVTLRKKETEEVHQNLHIYTAEGGKLALGLTLLFGLLLLISQI
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=393, Percent_Identity=31.8066157760814, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1790145, Length=398, Percent_Identity=24.3718592964824, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1789552, Length=375, Percent_Identity=22.9333333333333, Blast_Score=100, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 42368; Mature: 42368
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKLFGSALILSGTALGAGMLAIPMVLAQFGLFYSTLLMLIICAGTTYAALLLTEACSK CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC TELAFGINTVANKTIGKGGQLVTNALFYLLLFCMLIAYILGAADLIKRIFSMMNVEMSIE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH FAQVAFTLFASAFVVCGTQIIDKLNRLLFFFMISMLVLTLIILIPGMTVENLSQVTNHDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC GMLFDTSTILFTSFASMPVIPSLVAYNKEATKQQLRNMVILGSIIPLICYLVWLYAVVGN CCEEEHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LTANEITHFSNISDLIQTFSAKNEYIEIILSIFTSLALLTSFLGVAMALYNQNKDMISHN CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KIVTYVCTFILPLLGAGLAADQFLSVLGYAGVILVFLAIFIPLAMVVTLRKKETEEVHQN HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LHIYTAEGGKLALGLTLLFGLLLLISQI CEEEEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNFKLFGSALILSGTALGAGMLAIPMVLAQFGLFYSTLLMLIICAGTTYAALLLTEACSK CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC TELAFGINTVANKTIGKGGQLVTNALFYLLLFCMLIAYILGAADLIKRIFSMMNVEMSIE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH FAQVAFTLFASAFVVCGTQIIDKLNRLLFFFMISMLVLTLIILIPGMTVENLSQVTNHDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC GMLFDTSTILFTSFASMPVIPSLVAYNKEATKQQLRNMVILGSIIPLICYLVWLYAVVGN CCEEEHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LTANEITHFSNISDLIQTFSAKNEYIEIILSIFTSLALLTSFLGVAMALYNQNKDMISHN CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KIVTYVCTFILPLLGAGLAADQFLSVLGYAGVILVFLAIFIPLAMVVTLRKKETEEVHQN HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LHIYTAEGGKLALGLTLLFGLLLLISQI CEEEEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]