| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is tyrP [H]
Identifier: 59711778
GI number: 59711778
Start: 1301038
End: 1302192
Strand: Direct
Name: tyrP [H]
Synonym: VF_1171
Alternate gene names: 59711778
Gene position: 1301038-1302192 (Clockwise)
Preceding gene: 59711777
Following gene: 59711779
Centisome position: 44.9
GC content: 37.58
Gene sequence:
>1155_bases GTGAATTTAAAATTAATCGGAAGCTCACTTATTATTTCAGGTACTGCGCTAGGCGCTGGTATGCTGGCAATCCCAATGGT ATTGGCTCAATTTGGCCTACTTTGGGGTACTGCTCTAATGTTGTTTATCTGTCTTGGAACAACATATGCCGCTTTATTGC TGCTAGAAGCGAGTATTAATGTTGGTGGTGGTTTAGGTATGAACACCATCGCTCGTAAAAGTTTAGGTAAAAGTGGACAA ATTATTACTAATGGTCTGCTTTATGCGCTTTTAATCTGCTTATTAATGGCTTACATCTTAGGTGCTGGTGATCTATTAAA TAAGCTGTTGCGTGGTATTGGTGTTGAGTTGTCACTCATTCAAAGCCAGATTGCATTTACATTGGTTGCCGGCATTATTG TTGCTTCGGGAACTGCAGTTATCGATAAATTAAACCGTGTTTTATTTGGCATTATGCTGCTGATGCTTGTTTTAACGCTT GTATTTTTAGTTCCTGACATATCGTTTGAGAATATGACACAAGTGACGAATTCAAGTACGACCGATTTAGTTAAAACCAG TGCAATTATTTTTACCAGTTTTGGTTTTATGGTTGTTATCCCATCATTAGTGTCTTACAACCATGACGCAACACCAAAGC AACTGAGAAATATGGTTATTCTTGGTTCATTAATCCCATTAGTTTGTTACCTAGTATGGCTTTATGCTGTGGTTGGTAAT TTAACGGCTGAACAACTGATTCATTTTACAAATGTCTCTGAGTTAATCTCTGTATTTAGTGCAGAACATGCATTTATTAG TGTTGTGTTATCTGGTTTTACAGGTCTTGCTTTATTAACCTCATTCTTAGGTGTAGCAATGGCGCTTTTCACTCAAAACC AAGATATGTTTAAACAGAACAAAGTAGTAACTTATGTTATTAGTTTTATTCTGCCACTGACTGGCGCTATTTATGCGGCT GATCAATTCTTATCTGTTTTAAGCTACGCAGGGATCATCTTAGTTTTCTTAGCGGTCTTTGTACCTCTTGCAATGGTGGT AAAACTAAGAAAATCAGAGAATGCCGAGAAAACATACATTGCGGAGGGTGGGGTAGCTATGCTGACTTTCTCTTTTGCTT TTGGTGGTTTTCTTCTGATTTCACAAGTGATCTAA
Upstream 100 bases:
>100_bases TAATTTCAACCGCGTTATCTTTGTGGGTAATTTCTTGCGCGTTGAATTTGACAAAAAATAAAACTAAAGCTCAAACTCGA ATAAAAGTAAGGGAAACATT
Downstream 100 bases:
>100_bases TGTTATAAGCTCTTATTTACGGTGTTGTCACATACTATGAATAAGAGCACATCATATCGACAATCTAATTACAGTGTTGA TATAAATTTGTTTCAAAAAG
Product: tyrosine-specific transport protein
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MNLKLIGSSLIISGTALGAGMLAIPMVLAQFGLLWGTALMLFICLGTTYAALLLLEASINVGGGLGMNTIARKSLGKSGQ IITNGLLYALLICLLMAYILGAGDLLNKLLRGIGVELSLIQSQIAFTLVAGIIVASGTAVIDKLNRVLFGIMLLMLVLTL VFLVPDISFENMTQVTNSSTTDLVKTSAIIFTSFGFMVVIPSLVSYNHDATPKQLRNMVILGSLIPLVCYLVWLYAVVGN LTAEQLIHFTNVSELISVFSAEHAFISVVLSGFTGLALLTSFLGVAMALFTQNQDMFKQNKVVTYVISFILPLTGAIYAA DQFLSVLSYAGIILVFLAVFVPLAMVVKLRKSENAEKTYIAEGGVAMLTFSFAFGGFLLISQVI
Sequences:
>Translated_384_residues MNLKLIGSSLIISGTALGAGMLAIPMVLAQFGLLWGTALMLFICLGTTYAALLLLEASINVGGGLGMNTIARKSLGKSGQ IITNGLLYALLICLLMAYILGAGDLLNKLLRGIGVELSLIQSQIAFTLVAGIIVASGTAVIDKLNRVLFGIMLLMLVLTL VFLVPDISFENMTQVTNSSTTDLVKTSAIIFTSFGFMVVIPSLVSYNHDATPKQLRNMVILGSLIPLVCYLVWLYAVVGN LTAEQLIHFTNVSELISVFSAEHAFISVVLSGFTGLALLTSFLGVAMALFTQNQDMFKQNKVVTYVISFILPLTGAIYAA DQFLSVLSYAGIILVFLAVFVPLAMVVKLRKSENAEKTYIAEGGVAMLTFSFAFGGFLLISQVI >Mature_384_residues MNLKLIGSSLIISGTALGAGMLAIPMVLAQFGLLWGTALMLFICLGTTYAALLLLEASINVGGGLGMNTIARKSLGKSGQ IITNGLLYALLICLLMAYILGAGDLLNKLLRGIGVELSLIQSQIAFTLVAGIIVASGTAVIDKLNRVLFGIMLLMLVLTL VFLVPDISFENMTQVTNSSTTDLVKTSAIIFTSFGFMVVIPSLVSYNHDATPKQLRNMVILGSLIPLVCYLVWLYAVVGN LTAEQLIHFTNVSELISVFSAEHAFISVVLSGFTGLALLTSFLGVAMALFTQNQDMFKQNKVVTYVISFILPLTGAIYAA DQFLSVLSYAGIILVFLAVFVPLAMVVKLRKSENAEKTYIAEGGVAMLTFSFAFGGFLLISQVI
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=391, Percent_Identity=35.5498721227622, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI1789552, Length=370, Percent_Identity=24.8648648648649, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1790145, Length=363, Percent_Identity=26.4462809917355, Blast_Score=110, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 40994; Mature: 40994
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKLIGSSLIISGTALGAGMLAIPMVLAQFGLLWGTALMLFICLGTTYAALLLLEASIN CCCEEECCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VGGGLGMNTIARKSLGKSGQIITNGLLYALLICLLMAYILGAGDLLNKLLRGIGVELSLI CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH QSQIAFTLVAGIIVASGTAVIDKLNRVLFGIMLLMLVLTLVFLVPDISFENMTQVTNSST HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCH TDLVKTSAIIFTSFGFMVVIPSLVSYNHDATPKQLRNMVILGSLIPLVCYLVWLYAVVGN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LTAEQLIHFTNVSELISVFSAEHAFISVVLSGFTGLALLTSFLGVAMALFTQNQDMFKQN CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH KVVTYVISFILPLTGAIYAADQFLSVLSYAGIILVFLAVFVPLAMVVKLRKSENAEKTYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE AEGGVAMLTFSFAFGGFLLISQVI ECCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLKLIGSSLIISGTALGAGMLAIPMVLAQFGLLWGTALMLFICLGTTYAALLLLEASIN CCCEEECCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VGGGLGMNTIARKSLGKSGQIITNGLLYALLICLLMAYILGAGDLLNKLLRGIGVELSLI CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH QSQIAFTLVAGIIVASGTAVIDKLNRVLFGIMLLMLVLTLVFLVPDISFENMTQVTNSST HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCH TDLVKTSAIIFTSFGFMVVIPSLVSYNHDATPKQLRNMVILGSLIPLVCYLVWLYAVVGN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LTAEQLIHFTNVSELISVFSAEHAFISVVLSGFTGLALLTSFLGVAMALFTQNQDMFKQN CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH KVVTYVISFILPLTGAIYAADQFLSVLSYAGIILVFLAVFVPLAMVVKLRKSENAEKTYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE AEGGVAMLTFSFAFGGFLLISQVI ECCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503 [H]