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The map label for this gene is ycbK [H]

Identifier: 59711765

GI number: 59711765

Start: 1284538

End: 1285089

Strand: Direct

Name: ycbK [H]

Synonym: VF_1158

Alternate gene names: 59711765

Gene position: 1284538-1285089 (Clockwise)

Preceding gene: 59711764

Following gene: 59711767

Centisome position: 44.33

GC content: 38.41

Gene sequence:

>552_bases
ATGTCTGAATTTAGTCCATTACGCCGTAAGATCCTTCTTGGTGGCGCAGCTACTGCTGGTTTAAGTTTATTTCCTTCATT
CTCTTTTGCTTCACAATTTGCAGAGACGCCTCGTAAGTTAGCTTTGAGCAATTTACACACAGGTGAAGAATTAAAAACAG
AATATTTCAATGGACGACAATATCAAAGTGCGGAACTTCATAAGTTAAATCATTTATGCCGAGATTTCCGTCGTAACGAA
AGTATTGAGATGGATAAACGTCTATTTGATCAGTTATCAGCGATTCAAAATGTGATTGGTTGTGATACACAAGTTCAAAT
TATTTCAGGATATCGCTCACCAGCTACAAATGAAATGTTACGTGGGAAGTCTCACGGTGGTGTAGCGAAAAAAAGCTTAC
ATATGCTTGGTAAAGCAATGGATTTTCGTTTAGAAGGTGTACCATTAGCTGAAGTAAGAAAAGCGGCATTATCATTAAAA
GCGGGTGGAGTAGGTTATTACCCGGGTAGCAACTTTGTTCATATCGATACGGGTAGAGTACGTTTTTGGTAA

Upstream 100 bases:

>100_bases
CAGATAAAATTAACTGTTTATTATTTGACCAATTGATAATTGGTGTGTATCTTTGCGCTCAGTTACTGATTGATCTATTT
ATAAGTGAGTCCTTTACTGC

Downstream 100 bases:

>100_bases
TGAATACTTATTGAAAAAATGGCGACCAATGTGGTCGCCATTTTTGTATTCATTACTTGCTAATTAGGTTATCTCAATAA
AGATAATACGAATTAGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSEFSPLRRKILLGGAATAGLSLFPSFSFASQFAETPRKLALSNLHTGEELKTEYFNGRQYQSAELHKLNHLCRDFRRNE
SIEMDKRLFDQLSAIQNVIGCDTQVQIISGYRSPATNEMLRGKSHGGVAKKSLHMLGKAMDFRLEGVPLAEVRKAALSLK
AGGVGYYPGSNFVHIDTGRVRFW

Sequences:

>Translated_183_residues
MSEFSPLRRKILLGGAATAGLSLFPSFSFASQFAETPRKLALSNLHTGEELKTEYFNGRQYQSAELHKLNHLCRDFRRNE
SIEMDKRLFDQLSAIQNVIGCDTQVQIISGYRSPATNEMLRGKSHGGVAKKSLHMLGKAMDFRLEGVPLAEVRKAALSLK
AGGVGYYPGSNFVHIDTGRVRFW
>Mature_182_residues
SEFSPLRRKILLGGAATAGLSLFPSFSFASQFAETPRKLALSNLHTGEELKTEYFNGRQYQSAELHKLNHLCRDFRRNES
IEMDKRLFDQLSAIQNVIGCDTQVQIISGYRSPATNEMLRGKSHGGVAKKSLHMLGKAMDFRLEGVPLAEVRKAALSLKA
GGVGYYPGSNFVHIDTGRVRFW

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=183, Percent_Identity=53.551912568306, Blast_Score=195, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 20409; Mature: 20277

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFSPLRRKILLGGAATAGLSLFPSFSFASQFAETPRKLALSNLHTGEELKTEYFNGRQ
CCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCC
YQSAELHKLNHLCRDFRRNESIEMDKRLFDQLSAIQNVIGCDTQVQIISGYRSPATNEML
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
RGKSHGGVAKKSLHMLGKAMDFRLEGVPLAEVRKAALSLKAGGVGYYPGSNFVHIDTGRV
CCCCCCCHHHHHHHHHHHHHHCEECCCCHHHHHHHHHHHCCCCEEECCCCCEEEECCCCE
RFW
ECC
>Mature Secondary Structure 
SEFSPLRRKILLGGAATAGLSLFPSFSFASQFAETPRKLALSNLHTGEELKTEYFNGRQ
CCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCC
YQSAELHKLNHLCRDFRRNESIEMDKRLFDQLSAIQNVIGCDTQVQIISGYRSPATNEML
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
RGKSHGGVAKKSLHMLGKAMDFRLEGVPLAEVRKAALSLKAGGVGYYPGSNFVHIDTGRV
CCCCCCCHHHHHHHHHHHHHHCEECCCCHHHHHHHHHHHCCCCEEECCCCCEEEECCCCE
RFW
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]