Click here to switch to the map view.

The map label for this gene is yehT [C]

Identifier: 59711755

GI number: 59711755

Start: 1273637

End: 1274353

Strand: Reverse

Name: yehT [C]

Synonym: VF_1148

Alternate gene names: 59711755

Gene position: 1274353-1273637 (Counterclockwise)

Preceding gene: 59711756

Following gene: 59711754

Centisome position: 43.98

GC content: 36.26

Gene sequence:

>717_bases
ATGCTTAAAGCCATCGTAATAGATGATGAACTCTTTGCTAGAGAAGAATTAATAGAACAATTAAACGAAATTGGGCATAT
TGATATTATTGCCGAATGCGGTAATGCCATTGATGGCTTAAAACAAATTAATATCTTAAAACCTGATGTTGTCTTCTTAG
ATATTCAAATGCCCAGAATTACTGGAATGGAATTGATCAGCATGCTTGATCCTGAAACCATGCCGAACATTGTGTTTGTC
ACCGCTTACGATGAATTTGCAGTTAAAGCGTTTGAAGACAATGCGTTTGATTATCTATTAAAACCAATAGAACCAGCACG
ATTACAAAAAACCATTAAGCGTTTAATTCAAGCAGACAAGAAACAAGATTTAACTCCGCTTAGCCAACCAGATATCGATC
TCATCCCTTGTTCTGGTCATAACCGTATTCTACTTCTTCCATCTAATGAAATCGAAGTGGCAAGCATTCAAGCCTCTGGT
GTTGAATTATTGTCTAAAACTGAAAAAGCCTGCACGCAACTTACTTTAAAAGTACTTGAAGAAAAGACCCCTTTAATTCG
CTGCCATCGCCAATTTTTAATCAATCCACATTTTATTCGTGAGATTAAATTGCATGAAAATGGAACCAGCGAAATTGTCA
CTCAAAATGGCCATATCGCTCAAGTTAGTCGCCGTTACCTTAAAGAAATAAAAGAGCGTTTAGGTATCCATCATTGA

Upstream 100 bases:

>100_bases
TTAAAGAACCAGTTTGGTGATAATTTTGGCTTAACCATGAGCTGTATTAGTAATCAACAAACAAAAGCAACGATTCACCT
ACCAATAGAGAATAAAAACC

Downstream 100 bases:

>100_bases
TGTGTGAATATCATCAAAACCACTTAATCTGATATAAAACCACTCACTAGCAAAACACAACCACTCACCTTTTTTGGGCG
TGAACTCTTTACGCCCAACA

Product: putative two-component response-regulatory protein YehT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MLKAIVIDDELFAREELIEQLNEIGHIDIIAECGNAIDGLKQINILKPDVVFLDIQMPRITGMELISMLDPETMPNIVFV
TAYDEFAVKAFEDNAFDYLLKPIEPARLQKTIKRLIQADKKQDLTPLSQPDIDLIPCSGHNRILLLPSNEIEVASIQASG
VELLSKTEKACTQLTLKVLEEKTPLIRCHRQFLINPHFIREIKLHENGTSEIVTQNGHIAQVSRRYLKEIKERLGIHH

Sequences:

>Translated_238_residues
MLKAIVIDDELFAREELIEQLNEIGHIDIIAECGNAIDGLKQINILKPDVVFLDIQMPRITGMELISMLDPETMPNIVFV
TAYDEFAVKAFEDNAFDYLLKPIEPARLQKTIKRLIQADKKQDLTPLSQPDIDLIPCSGHNRILLLPSNEIEVASIQASG
VELLSKTEKACTQLTLKVLEEKTPLIRCHRQFLINPHFIREIKLHENGTSEIVTQNGHIAQVSRRYLKEIKERLGIHH
>Mature_238_residues
MLKAIVIDDELFAREELIEQLNEIGHIDIIAECGNAIDGLKQINILKPDVVFLDIQMPRITGMELISMLDPETMPNIVFV
TAYDEFAVKAFEDNAFDYLLKPIEPARLQKTIKRLIQADKKQDLTPLSQPDIDLIPCSGHNRILLLPSNEIEVASIQASG
VELLSKTEKACTQLTLKVLEEKTPLIRCHRQFLINPHFIREIKLHENGTSEIVTQNGHIAQVSRRYLKEIKERLGIHH

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=239, Percent_Identity=51.4644351464435, Blast_Score=254, Evalue=3e-69,
Organism=Escherichia coli, GI1788724, Length=240, Percent_Identity=29.5833333333333, Blast_Score=104, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 27087; Mature: 27087

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKAIVIDDELFAREELIEQLNEIGHIDIIAECGNAIDGLKQINILKPDVVFLDIQMPRI
CCEEEEECHHHHHHHHHHHHHHHCCCEEEHHHHCCHHHHHHHCCEECCCEEEEEEECCCH
TGMELISMLDPETMPNIVFVTAYDEFAVKAFEDNAFDYLLKPIEPARLQKTIKRLIQADK
HHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCC
KQDLTPLSQPDIDLIPCSGHNRILLLPSNEIEVASIQASGVELLSKTEKACTQLTLKVLE
CCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
EKTPLIRCHRQFLINPHFIREIKLHENGTSEIVTQNGHIAQVSRRYLKEIKERLGIHH
CCCHHHHHHHHHHCCCHHEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKAIVIDDELFAREELIEQLNEIGHIDIIAECGNAIDGLKQINILKPDVVFLDIQMPRI
CCEEEEECHHHHHHHHHHHHHHHCCCEEEHHHHCCHHHHHHHCCEECCCEEEEEEECCCH
TGMELISMLDPETMPNIVFVTAYDEFAVKAFEDNAFDYLLKPIEPARLQKTIKRLIQADK
HHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCC
KQDLTPLSQPDIDLIPCSGHNRILLLPSNEIEVASIQASGVELLSKTEKACTQLTLKVLE
CCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
EKTPLIRCHRQFLINPHFIREIKLHENGTSEIVTQNGHIAQVSRRYLKEIKERLGIHH
CCCHHHHHHHHHHCCCHHEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]