| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is bax [H]
Identifier: 59711704
GI number: 59711704
Start: 1212031
End: 1212939
Strand: Reverse
Name: bax [H]
Synonym: VF_1097
Alternate gene names: 59711704
Gene position: 1212939-1212031 (Counterclockwise)
Preceding gene: 59711705
Following gene: 59711699
Centisome position: 41.86
GC content: 35.86
Gene sequence:
>909_bases ATGTCTTTATCTAAAACGTTAAAACATATTTTTGCTTCTCTGCTTTTTTTCATCTCTTCAATTTGCTTAGCCGATACAAC ACTTCCGTTATCGCCAGAAAAGATAAGCTCACCCTACCCTAATGTAAAAGTGACTTCTCTTAATTCTGCACAATCTCTTA TTAAGGAATTTACGACTCATCAATATTCATTAGATCGTGTTATCAAAGAACACTCTATGCCGACTTTTTTTGTAGAGAAT CTACCGGATGATTTAAATGCGCTTCCTGTTCAAGAAAAGATTTCAGGATTTATTCGTTTATTGTTACCAACAATTATTGA AGTAAATGAACACATTAGTGCTGTTAGAGAGGAAGTGATTACCCTTTCTAAACGTCCAACGAGCGAATGGACAAAAGAAG AAACATTATGGATGCATAACCTAATGGATTCTTATTTCGTAAAAACCCAAAATATTGATGATCTACTCTTACGTCTAAAT GTAATTCCAGTAGGAATGGTATTAGCACAAGGTATCGATGAGAGTGGTTGGGGAACCAGTTATTTTGCAATTAATGGCAA TAGCTTATATGGCGAACATCTATCGTCTAAAGGTGGTAAATATTTAAGTACTCCTGGCGGCCATGTAAAAGTTGCAGCAT TCGACAATTTATTCGCAGGTACTGCACGCTACATGTATAACTTAAACACCACATCTGCTTATAAAGACCTTTGGAAACTA CGCCAACAACTAAGCGAAGAAGGAAAATTATCAGGTTATGAGCTAGTCGAGTCTTTATCTCACTACTCTACCCGTGGTGA AGCTTATGTTGAGAATCTGCAAGCATTAATTAAACATCATAAATTAGATAGTTTTGATCAGGTTACATTTGATAGCTCAA CGCCGATTCGAGTGAGATTTGAAAACTAG
Upstream 100 bases:
>100_bases ACCGTTTTCGATCGCCCCTCTAATTGATTTTTCTGGGACAATACAAATAACCTAAAGATAATCCCATGTTATTATCTATT TGAAATATGGAACTTCATTT
Downstream 100 bases:
>100_bases GGACTAGGGACTAGGGACTAGGGACTAGGGACTAGGGACTAGGGACTAGGGACTAGGGACTAGGGACTAGGGACTAGAAA AAATAAAGGTTGCGACTTTT
Product: BAX protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSLSKTLKHIFASLLFFISSICLADTTLPLSPEKISSPYPNVKVTSLNSAQSLIKEFTTHQYSLDRVIKEHSMPTFFVEN LPDDLNALPVQEKISGFIRLLLPTIIEVNEHISAVREEVITLSKRPTSEWTKEETLWMHNLMDSYFVKTQNIDDLLLRLN VIPVGMVLAQGIDESGWGTSYFAINGNSLYGEHLSSKGGKYLSTPGGHVKVAAFDNLFAGTARYMYNLNTTSAYKDLWKL RQQLSEEGKLSGYELVESLSHYSTRGEAYVENLQALIKHHKLDSFDQVTFDSSTPIRVRFEN
Sequences:
>Translated_302_residues MSLSKTLKHIFASLLFFISSICLADTTLPLSPEKISSPYPNVKVTSLNSAQSLIKEFTTHQYSLDRVIKEHSMPTFFVEN LPDDLNALPVQEKISGFIRLLLPTIIEVNEHISAVREEVITLSKRPTSEWTKEETLWMHNLMDSYFVKTQNIDDLLLRLN VIPVGMVLAQGIDESGWGTSYFAINGNSLYGEHLSSKGGKYLSTPGGHVKVAAFDNLFAGTARYMYNLNTTSAYKDLWKL RQQLSEEGKLSGYELVESLSHYSTRGEAYVENLQALIKHHKLDSFDQVTFDSSTPIRVRFEN >Mature_301_residues SLSKTLKHIFASLLFFISSICLADTTLPLSPEKISSPYPNVKVTSLNSAQSLIKEFTTHQYSLDRVIKEHSMPTFFVENL PDDLNALPVQEKISGFIRLLLPTIIEVNEHISAVREEVITLSKRPTSEWTKEETLWMHNLMDSYFVKTQNIDDLLLRLNV IPVGMVLAQGIDESGWGTSYFAINGNSLYGEHLSSKGGKYLSTPGGHVKVAAFDNLFAGTARYMYNLNTTSAYKDLWKLR QQLSEEGKLSGYELVESLSHYSTRGEAYVENLQALIKHHKLDSFDQVTFDSSTPIRVRFEN
Specific function: Unknown
COG id: COG2992
COG function: function code R; Uncharacterized FlgJ-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994948, Length=215, Percent_Identity=30.2325581395349, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: NA
Molecular weight: Translated: 34119; Mature: 33988
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSKTLKHIFASLLFFISSICLADTTLPLSPEKISSPYPNVKVTSLNSAQSLIKEFTTH CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECHHHHHHHHHHHHH QYSLDRVIKEHSMPTFFVENLPDDLNALPVQEKISGFIRLLLPTIIEVNEHISAVREEVI HHHHHHHHHHHCCCEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLSKRPTSEWTKEETLWMHNLMDSYFVKTQNIDDLLLRLNVIPVGMVLAQGIDESGWGTS HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE YFAINGNSLYGEHLSSKGGKYLSTPGGHVKVAAFDNLFAGTARYMYNLNTTSAYKDLWKL EEEEECCCCCHHHHHCCCCCEECCCCCEEEEEEHHHHHHHHHHHEEECCCHHHHHHHHHH RQQLSEEGKLSGYELVESLSHYSTRGEAYVENLQALIKHHKLDSFDQVTFDSSTPIRVRF HHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEE EN CC >Mature Secondary Structure SLSKTLKHIFASLLFFISSICLADTTLPLSPEKISSPYPNVKVTSLNSAQSLIKEFTTH CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECHHHHHHHHHHHHH QYSLDRVIKEHSMPTFFVENLPDDLNALPVQEKISGFIRLLLPTIIEVNEHISAVREEVI HHHHHHHHHHHCCCEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLSKRPTSEWTKEETLWMHNLMDSYFVKTQNIDDLLLRLNVIPVGMVLAQGIDESGWGTS HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE YFAINGNSLYGEHLSSKGGKYLSTPGGHVKVAAFDNLFAGTARYMYNLNTTSAYKDLWKL EEEEECCCCCHHHHHCCCCCEECCCCCEEEEEEHHHHHHHHHHHEEECCCHHHHHHHHHH RQQLSEEGKLSGYELVESLSHYSTRGEAYVENLQALIKHHKLDSFDQVTFDSSTPIRVRF HHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEE EN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 1544897 [H]