| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711655
Identifier: 59711655
GI number: 59711655
Start: 1155572
End: 1156090
Strand: Direct
Name: 59711655
Synonym: VF_1048
Alternate gene names: NA
Gene position: 1155572-1156090 (Clockwise)
Preceding gene: 59711654
Following gene: 59711658
Centisome position: 39.88
GC content: 28.32
Gene sequence:
>519_bases ATGTTCGAATGGTTTGAAAGTATTTTTGTTACATCGAGTGATAAATCTAGATTTATCGCAATTGTTGTTTCAACTTTTGT AGCTATCTTTGTTTTGTTATTAAGCCAGAGGTTTACAACAAAACGTGAACGTTCGAAGTTATTAATCGAAAAAATTGAAG AAATGTATAAAGTTTCAATCGATTATTCTAGTGCTGCTAATCAGATACTTAAAGATCTTAATAATCCAAAGAAATATGAT AAAAATGGATATTACATCATCGATCAAGTGGTATATGGGAATATGAATGATTCAATTAGAAAAATGGAAATGCTGTGTGG CCTTTATTTTCCTAAAATTGAGTTTAAGGTAAGTGATTATTCGATAGTTAATATGCCAATCGTTAATATTGCCATAAAAG GGAAAAAATTAAATGAGGGTGAAGCCTATCATATTTATGAGGATTCCCGAAATTATATAATTAATGCAGAACAAAAAATC ACAAAATTATGTAGAGAGCTTATAAGAAAATATGTGTAA
Upstream 100 bases:
>100_bases TTGTGGTTTTTTTTGGTTTACTGCGTTTAATGGTAAATCTGGGCTTAGTTTGCATGGTAGCAAATTTGTTATGCAGGCGT TATATTTTAATGAGGAAAGT
Downstream 100 bases:
>100_bases AAGATATATAACAAATGCATCAATAACGATTTGCTACACTCGGCATATTAGTCTGCCGAGTGTTTTTTCATTTAATATTA ACCTTTAAATGTATTAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MFEWFESIFVTSSDKSRFIAIVVSTFVAIFVLLLSQRFTTKRERSKLLIEKIEEMYKVSIDYSSAANQILKDLNNPKKYD KNGYYIIDQVVYGNMNDSIRKMEMLCGLYFPKIEFKVSDYSIVNMPIVNIAIKGKKLNEGEAYHIYEDSRNYIINAEQKI TKLCRELIRKYV
Sequences:
>Translated_172_residues MFEWFESIFVTSSDKSRFIAIVVSTFVAIFVLLLSQRFTTKRERSKLLIEKIEEMYKVSIDYSSAANQILKDLNNPKKYD KNGYYIIDQVVYGNMNDSIRKMEMLCGLYFPKIEFKVSDYSIVNMPIVNIAIKGKKLNEGEAYHIYEDSRNYIINAEQKI TKLCRELIRKYV >Mature_172_residues MFEWFESIFVTSSDKSRFIAIVVSTFVAIFVLLLSQRFTTKRERSKLLIEKIEEMYKVSIDYSSAANQILKDLNNPKKYD KNGYYIIDQVVYGNMNDSIRKMEMLCGLYFPKIEFKVSDYSIVNMPIVNIAIKGKKLNEGEAYHIYEDSRNYIINAEQKI TKLCRELIRKYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20264; Mature: 20264
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEWFESIFVTSSDKSRFIAIVVSTFVAIFVLLLSQRFTTKRERSKLLIEKIEEMYKVSI CCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DYSSAANQILKDLNNPKKYDKNGYYIIDQVVYGNMNDSIRKMEMLCGLYFPKIEFKVSDY CHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCE SIVNMPIVNIAIKGKKLNEGEAYHIYEDSRNYIINAEQKITKLCRELIRKYV EEEECCEEEEEEECCCCCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHCC >Mature Secondary Structure MFEWFESIFVTSSDKSRFIAIVVSTFVAIFVLLLSQRFTTKRERSKLLIEKIEEMYKVSI CCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DYSSAANQILKDLNNPKKYDKNGYYIIDQVVYGNMNDSIRKMEMLCGLYFPKIEFKVSDY CHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCE SIVNMPIVNIAIKGKKLNEGEAYHIYEDSRNYIINAEQKITKLCRELIRKYV EEEECCEEEEEEECCCCCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA