Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is 59711655

Identifier: 59711655

GI number: 59711655

Start: 1155572

End: 1156090

Strand: Direct

Name: 59711655

Synonym: VF_1048

Alternate gene names: NA

Gene position: 1155572-1156090 (Clockwise)

Preceding gene: 59711654

Following gene: 59711658

Centisome position: 39.88

GC content: 28.32

Gene sequence:

>519_bases
ATGTTCGAATGGTTTGAAAGTATTTTTGTTACATCGAGTGATAAATCTAGATTTATCGCAATTGTTGTTTCAACTTTTGT
AGCTATCTTTGTTTTGTTATTAAGCCAGAGGTTTACAACAAAACGTGAACGTTCGAAGTTATTAATCGAAAAAATTGAAG
AAATGTATAAAGTTTCAATCGATTATTCTAGTGCTGCTAATCAGATACTTAAAGATCTTAATAATCCAAAGAAATATGAT
AAAAATGGATATTACATCATCGATCAAGTGGTATATGGGAATATGAATGATTCAATTAGAAAAATGGAAATGCTGTGTGG
CCTTTATTTTCCTAAAATTGAGTTTAAGGTAAGTGATTATTCGATAGTTAATATGCCAATCGTTAATATTGCCATAAAAG
GGAAAAAATTAAATGAGGGTGAAGCCTATCATATTTATGAGGATTCCCGAAATTATATAATTAATGCAGAACAAAAAATC
ACAAAATTATGTAGAGAGCTTATAAGAAAATATGTGTAA

Upstream 100 bases:

>100_bases
TTGTGGTTTTTTTTGGTTTACTGCGTTTAATGGTAAATCTGGGCTTAGTTTGCATGGTAGCAAATTTGTTATGCAGGCGT
TATATTTTAATGAGGAAAGT

Downstream 100 bases:

>100_bases
AAGATATATAACAAATGCATCAATAACGATTTGCTACACTCGGCATATTAGTCTGCCGAGTGTTTTTTCATTTAATATTA
ACCTTTAAATGTATTAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MFEWFESIFVTSSDKSRFIAIVVSTFVAIFVLLLSQRFTTKRERSKLLIEKIEEMYKVSIDYSSAANQILKDLNNPKKYD
KNGYYIIDQVVYGNMNDSIRKMEMLCGLYFPKIEFKVSDYSIVNMPIVNIAIKGKKLNEGEAYHIYEDSRNYIINAEQKI
TKLCRELIRKYV

Sequences:

>Translated_172_residues
MFEWFESIFVTSSDKSRFIAIVVSTFVAIFVLLLSQRFTTKRERSKLLIEKIEEMYKVSIDYSSAANQILKDLNNPKKYD
KNGYYIIDQVVYGNMNDSIRKMEMLCGLYFPKIEFKVSDYSIVNMPIVNIAIKGKKLNEGEAYHIYEDSRNYIINAEQKI
TKLCRELIRKYV
>Mature_172_residues
MFEWFESIFVTSSDKSRFIAIVVSTFVAIFVLLLSQRFTTKRERSKLLIEKIEEMYKVSIDYSSAANQILKDLNNPKKYD
KNGYYIIDQVVYGNMNDSIRKMEMLCGLYFPKIEFKVSDYSIVNMPIVNIAIKGKKLNEGEAYHIYEDSRNYIINAEQKI
TKLCRELIRKYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20264; Mature: 20264

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEWFESIFVTSSDKSRFIAIVVSTFVAIFVLLLSQRFTTKRERSKLLIEKIEEMYKVSI
CCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DYSSAANQILKDLNNPKKYDKNGYYIIDQVVYGNMNDSIRKMEMLCGLYFPKIEFKVSDY
CHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCE
SIVNMPIVNIAIKGKKLNEGEAYHIYEDSRNYIINAEQKITKLCRELIRKYV
EEEECCEEEEEEECCCCCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFEWFESIFVTSSDKSRFIAIVVSTFVAIFVLLLSQRFTTKRERSKLLIEKIEEMYKVSI
CCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DYSSAANQILKDLNNPKKYDKNGYYIIDQVVYGNMNDSIRKMEMLCGLYFPKIEFKVSDY
CHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCE
SIVNMPIVNIAIKGKKLNEGEAYHIYEDSRNYIINAEQKITKLCRELIRKYV
EEEECCEEEEEEECCCCCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA