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The map label for this gene is ainS [H]

Identifier: 59711644

GI number: 59711644

Start: 1142800

End: 1143942

Strand: Reverse

Name: ainS [H]

Synonym: VF_1037

Alternate gene names: 59711644

Gene position: 1143942-1142800 (Counterclockwise)

Preceding gene: 59711646

Following gene: 59711643

Centisome position: 39.48

GC content: 33.51

Gene sequence:

>1143_bases
TTGTACGATTATTGTTCTCAAACGCAGAATTTTAATTTACTTCAACAACTGATCAATGCAAGAGAACGAATCATTTTGAA
TAAATTTGAAGGCGGAACGATTGGAAATTTGGAATACTTATTTTCAACATCAGAAGCGGCAGAAATCTTAGGAAAACAAC
CTTGTAGTTCATTACCTAAGGTCTATTTTCATATAGAGCAAATGGCTATCAAAGTTTTTGGTTGTCTTTTGAAATGCAGT
ACTGAATTTGAAATGTTTAAACTTATTCATAAACCAATATCTGTACTTCATCGTCATCTAGATGTAACGAAAAAAAACAG
TACCTCAGCCATTATTGATGAAAAATATCATTACGAACTGGTTCAAGATATCTCAACAGACGAACGTTATTTCCACACTG
AATTTAGCGAACACCCCCTTCCTCTTTCAGATGCCATTGTACTCATTAATATCGCAACCTTCATTAAAGAACACAAGTGG
TATGAAATGCTAAATCATCTAGAAATTTCGTCCAAAGGAGAGCATTTTATTCTCTATCAATATACTGACAACAATATCTA
TCCAACCATTATTTCATCTGCCTTAATCCAAACCACATCGAATAAGCATGACTGGCTCTTTTTCGACACTTTCTTTCAAA
ATACCAAATGGAAACCAAACCTCAACGCTGATGGACTGTTATCTCTTTCCCATGCGACATTCATGAGTCCGTTAGCAAGG
TCACACTTTGTTGATAAAAGCAGTACCGAAATCGAAAATGACTTATTTTATTCTATCTTAGATAAAACAAAGGCATGTGA
AGCGATTCGACTTACTATTAGTGGGGAGAAATCTAAAGCTAACTATCATCTGTATTTAGCACAAAAAGGATTGGCTATGG
CTTTAAAGGAAAGTGGAAGAGATATTGTATTCACGATAATAGAAAAACCAGCAATGGTATTATTTTATCAATCGATGAAT
TTACTGACACCAACTCAATCTCCTTATGTTTTCACAAGTGAGCAAGATGTAAATAAATCAGGAATAATCACTTATAAAGG
GATCTGGCTTTTAAAAAATGCATCATCTGCTTTCAATCAATATAGTTTTAAGGCATACAATGCTAATATTATAAGCCTAA
GAAAAAAACTTCGAAATCAGTGA

Upstream 100 bases:

>100_bases
AGTATTATGAAAAACTTCACACTTCTTTTAAATACACTTCCATCTATCTCTCACGAAGAGATAGTCGAAAAAAAACCTGC
AATATGAATTTATAAAAGAG

Downstream 100 bases:

>100_bases
GTTTTATATAAATGTTAACTACTTTACCTAAAGTTTATTTACTACTGACAACCTCAGCAATCATCTTGCTTTGGGTAGGG
TATTTTATCCGCTCTCTATA

Product: C8-HSL autoinducer synthesis protein AinS

Products: NA

Alternate protein names: AHL synthase luxM [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MYDYCSQTQNFNLLQQLINARERIILNKFEGGTIGNLEYLFSTSEAAEILGKQPCSSLPKVYFHIEQMAIKVFGCLLKCS
TEFEMFKLIHKPISVLHRHLDVTKKNSTSAIIDEKYHYELVQDISTDERYFHTEFSEHPLPLSDAIVLINIATFIKEHKW
YEMLNHLEISSKGEHFILYQYTDNNIYPTIISSALIQTTSNKHDWLFFDTFFQNTKWKPNLNADGLLSLSHATFMSPLAR
SHFVDKSSTEIENDLFYSILDKTKACEAIRLTISGEKSKANYHLYLAQKGLAMALKESGRDIVFTIIEKPAMVLFYQSMN
LLTPTQSPYVFTSEQDVNKSGIITYKGIWLLKNASSAFNQYSFKAYNANIISLRKKLRNQ

Sequences:

>Translated_380_residues
MYDYCSQTQNFNLLQQLINARERIILNKFEGGTIGNLEYLFSTSEAAEILGKQPCSSLPKVYFHIEQMAIKVFGCLLKCS
TEFEMFKLIHKPISVLHRHLDVTKKNSTSAIIDEKYHYELVQDISTDERYFHTEFSEHPLPLSDAIVLINIATFIKEHKW
YEMLNHLEISSKGEHFILYQYTDNNIYPTIISSALIQTTSNKHDWLFFDTFFQNTKWKPNLNADGLLSLSHATFMSPLAR
SHFVDKSSTEIENDLFYSILDKTKACEAIRLTISGEKSKANYHLYLAQKGLAMALKESGRDIVFTIIEKPAMVLFYQSMN
LLTPTQSPYVFTSEQDVNKSGIITYKGIWLLKNASSAFNQYSFKAYNANIISLRKKLRNQ
>Mature_380_residues
MYDYCSQTQNFNLLQQLINARERIILNKFEGGTIGNLEYLFSTSEAAEILGKQPCSSLPKVYFHIEQMAIKVFGCLLKCS
TEFEMFKLIHKPISVLHRHLDVTKKNSTSAIIDEKYHYELVQDISTDERYFHTEFSEHPLPLSDAIVLINIATFIKEHKW
YEMLNHLEISSKGEHFILYQYTDNNIYPTIISSALIQTTSNKHDWLFFDTFFQNTKWKPNLNADGLLSLSHATFMSPLAR
SHFVDKSSTEIENDLFYSILDKTKACEAIRLTISGEKSKANYHLYLAQKGLAMALKESGRDIVFTIIEKPAMVLFYQSMN
LLTPTQSPYVFTSEQDVNKSGIITYKGIWLLKNASSAFNQYSFKAYNANIISLRKKLRNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the luxM / vanM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020384
- InterPro:   IPR020374
- ProDom:   PD037532
- ProDom:   PD097636 [H]

Pfam domain/function: NA

EC number: =2.3.1.184 [H]

Molecular weight: Translated: 43853; Mature: 43853

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDYCSQTQNFNLLQQLINARERIILNKFEGGTIGNLEYLFSTSEAAEILGKQPCSSLPK
CCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCEEECCHHHHHHHCCCCCHHHHH
VYFHIEQMAIKVFGCLLKCSTEFEMFKLIHKPISVLHRHLDVTKKNSTSAIIDEKYHYEL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHH
VQDISTDERYFHTEFSEHPLPLSDAIVLINIATFIKEHKWYEMLNHLEISSKGEHFILYQ
HHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
YTDNNIYPTIISSALIQTTSNKHDWLFFDTFFQNTKWKPNLNADGLLSLSHATFMSPLAR
EECCCCCHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHH
SHFVDKSSTEIENDLFYSILDKTKACEAIRLTISGEKSKANYHLYLAQKGLAMALKESGR
HHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHHCCC
DIVFTIIEKPAMVLFYQSMNLLTPTQSPYVFTSEQDVNKSGIITYKGIWLLKNASSAFNQ
EEEEEEECCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCHHHHHC
YSFKAYNANIISLRKKLRNQ
CEEEEECCHHHHHHHHHCCC
>Mature Secondary Structure
MYDYCSQTQNFNLLQQLINARERIILNKFEGGTIGNLEYLFSTSEAAEILGKQPCSSLPK
CCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCEEECCHHHHHHHCCCCCHHHHH
VYFHIEQMAIKVFGCLLKCSTEFEMFKLIHKPISVLHRHLDVTKKNSTSAIIDEKYHYEL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHH
VQDISTDERYFHTEFSEHPLPLSDAIVLINIATFIKEHKWYEMLNHLEISSKGEHFILYQ
HHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
YTDNNIYPTIISSALIQTTSNKHDWLFFDTFFQNTKWKPNLNADGLLSLSHATFMSPLAR
EECCCCCHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHH
SHFVDKSSTEIENDLFYSILDKTKACEAIRLTISGEKSKANYHLYLAQKGLAMALKESGR
HHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHHCCC
DIVFTIIEKPAMVLFYQSMNLLTPTQSPYVFTSEQDVNKSGIITYKGIWLLKNASSAFNQ
EEEEEEECCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCHHHHHC
YSFKAYNANIISLRKKLRNQ
CEEEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA