| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is ainR [H]
Identifier: 59711643
GI number: 59711643
Start: 1140329
End: 1142788
Strand: Reverse
Name: ainR [H]
Synonym: VF_1036
Alternate gene names: 59711643
Gene position: 1142788-1140329 (Counterclockwise)
Preceding gene: 59711644
Following gene: 172087687
Centisome position: 39.44
GC content: 32.24
Gene sequence:
>2460_bases ATGTTAACTACTTTACCTAAAGTTTATTTACTACTGACAACCTCAGCAATCATCTTGCTTTGGGTAGGGTATTTTATCCG CTCTCTATATAGAGAGCGGACAAAGGTAAACCCTTACATTTATTCATCATACATTTTTTATGCGTTCTTTATTATTCTAT GGATACTAAGTAACGCCTACTTTCAATCACCATTACTCACTTATTTCGATGAATCCGTAGCTATTTTCATGGCACTTTTT GCCAATATGACTTCGTATCTAGCATTTGCGTTTGCTTTTCTATTTTCATGTCGTTTAGCATCAAAACACTCAGACAAAAG ACTCTCTAAATGGCAGTTTGGCTTAACAAGCATAACAACACTTGTCGCACTAATTGTGAATGTTATCCCTAACTTAACGG TTATAGGAGTGACAATTCAAGCTCCTAGCGTATTCACCATTGAGTTCGGGCCCTTTGCTCCTTTGTTTTTCCTAAACGCA TTTTTGTTTGTAATTCTAACCAGTATTAATTTCTTTAAACTTAGAAAAAGTAATATAAAACTTAATAAAGAAAAATCTGT TTATCTAATGATTGGGATATTTATTTACATGATCTCAACCATTGCTTCTCAAATTATCATCCCTGTCATATGGGCAGATT TTTCATATACATGGCTACCTCCAACCTTATCAGTCACAGAAGCTTTATTAATTGGTTACACTCTACTTTATCATCGACTA TATAGTTTTAAATATCTATTATTCTGGTCACTCTCATATTCAATAAATTTAATATTGTATATAACCCCTATTGTAATTAT TTATAGTTCATCAAGTAACCCTAACTTATTCTATGTTTATGCTTTATCAATTATAATAACCGGACTGTTTTGGGATAAAA CACTTAAAAAATCAAAAAAGATAGCATCTATTATTATATATAAAGATCAACAAACACCCGTTGAGAAAATATATAAGATA GCTGAGGAGTTTAAATACTCAAGCAGTAATGCCATCATAAAATTAGCCTCAATACTAAATACTCCAAAAGAAGAATTATT ATTAATTGGAAAAAACACGAATTACAATATTTTCATCCCGCACTTAAATGAAAGCCATTCCGCCCTAGTTAAAGATGAGC TCGATTATCAAATCCATTACGCTCTTGAAACTGGTAATTCAGCACTTCATCAAGTACAAGAAAAAATGGATCAAAGCAAA ACCGCATTAATCTTACCTATTTTTGGTGAAAATAAGCTGATATCGCATTTCTTAATCTCAGCAAATAAACACGATAATGC AACCTTTTCAAATGAAGAGATCTCAGCAATTCAATGGGTGTTAACCAAGGTTCAAGGTTATATTGAAAGTGAGCAAAAAG TCCGTCAATCACAAGCTCTTGCTAACTCTATTGCTCATGAGATGCGAAATCCATTATCACAACTTCAATATCATTTTGAA AAAATCAAACATCACTATCAAAAAAATACTGAACATGAAAAGCAAGAAGATCTGATAAAAAATGAATTAAACCAAGGATG TTTAGCGATTCAAAAAGGAGCGCAATTAATTGATATCATTCTTAGTGAAGCAAAGAATACAACAATAAGTGATGCTCTAT TCCAACATTATTCAATTTCACTGTTAACTCAACAAATTATTGATGAATATGTATTCGACTCTGAAGAAATGAAACAAAAA ATAACCCTGAATCTTGAAGACGATTTCATCGTAAATATCAATGATACTCTATATGGATTCATACTTTTTAATTTATTAAG GAATGCAACACATTACTTTGATGAATATAAAAGTTCTATATCTATTCGATTAGTTCGAGGATTTGCGACCAATAAATTAA TATTTAGAGATACCGGCCCAGGAATTGATTCTCACATTCTTCCTAATATCTTTGATGATTTCTTTACTCATAATAAGAAA GGCGGCAGTGGGTTAGGACTATCTTATTGCTTACGTGTTATGCATGCCTTTGAGGGAAACATAGTTTGTTATTCAACCAA AGGTGAATTCACCGAATTTGTCCTTAGCTTTCCTCGTATAGAAGGTAATATTAACGCATTAAATACCAAACCAAGCTCCC CACCACTAATTAAAGATAAAGACAATTCACTTAAAACAGTATTAATTGTAGATGATAAAAAAGTACAGCGTATGTTAATT CATACTTTTATAAATAAAGATAACTTAACGCTTCTACAAGCAGAAAATGGTGAAGAAGCCGTAGAGATGGCAACCAATAA TAAGATCGATCTTATTTTTATGGACTCTCGCATGCCGATAATGAATGGAATAGATGCGGCTAAAAAAATCAAGATTCTCT ACCCTCATTTACCTATTATTGCGCTAACGGGTGAATCTAGCCACGAAGAAATCAGTGCAATCACGCAAGTAATGGATGGG TATTTAACTAAACCAGTATCTAAAACACAATTACTGCAGGTCGTAGATAAGTGGTTATAA
Upstream 100 bases:
>100_bases AAAATGCATCATCTGCTTTCAATCAATATAGTTTTAAGGCATACAATGCTAATATTATAAGCCTAAGAAAAAAACTTCGA AATCAGTGAGTTTTATATAA
Downstream 100 bases:
>100_bases CACCGATAAAAAAATAGCCAGAACAACTGTCTGGCTACTTCGATAATTTATTAATTATTCAAACGGTGTTGGATCACCAG CACCAACTCGAGCAATTTTA
Product: putative autoinducer regulatory protein AinR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 819; Mature: 819
Protein sequence:
>819_residues MLTTLPKVYLLLTTSAIILLWVGYFIRSLYRERTKVNPYIYSSYIFYAFFIILWILSNAYFQSPLLTYFDESVAIFMALF ANMTSYLAFAFAFLFSCRLASKHSDKRLSKWQFGLTSITTLVALIVNVIPNLTVIGVTIQAPSVFTIEFGPFAPLFFLNA FLFVILTSINFFKLRKSNIKLNKEKSVYLMIGIFIYMISTIASQIIIPVIWADFSYTWLPPTLSVTEALLIGYTLLYHRL YSFKYLLFWSLSYSINLILYITPIVIIYSSSSNPNLFYVYALSIIITGLFWDKTLKKSKKIASIIIYKDQQTPVEKIYKI AEEFKYSSSNAIIKLASILNTPKEELLLIGKNTNYNIFIPHLNESHSALVKDELDYQIHYALETGNSALHQVQEKMDQSK TALILPIFGENKLISHFLISANKHDNATFSNEEISAIQWVLTKVQGYIESEQKVRQSQALANSIAHEMRNPLSQLQYHFE KIKHHYQKNTEHEKQEDLIKNELNQGCLAIQKGAQLIDIILSEAKNTTISDALFQHYSISLLTQQIIDEYVFDSEEMKQK ITLNLEDDFIVNINDTLYGFILFNLLRNATHYFDEYKSSISIRLVRGFATNKLIFRDTGPGIDSHILPNIFDDFFTHNKK GGSGLGLSYCLRVMHAFEGNIVCYSTKGEFTEFVLSFPRIEGNINALNTKPSSPPLIKDKDNSLKTVLIVDDKKVQRMLI HTFINKDNLTLLQAENGEEAVEMATNNKIDLIFMDSRMPIMNGIDAAKKIKILYPHLPIIALTGESSHEEISAITQVMDG YLTKPVSKTQLLQVVDKWL
Sequences:
>Translated_819_residues MLTTLPKVYLLLTTSAIILLWVGYFIRSLYRERTKVNPYIYSSYIFYAFFIILWILSNAYFQSPLLTYFDESVAIFMALF ANMTSYLAFAFAFLFSCRLASKHSDKRLSKWQFGLTSITTLVALIVNVIPNLTVIGVTIQAPSVFTIEFGPFAPLFFLNA FLFVILTSINFFKLRKSNIKLNKEKSVYLMIGIFIYMISTIASQIIIPVIWADFSYTWLPPTLSVTEALLIGYTLLYHRL YSFKYLLFWSLSYSINLILYITPIVIIYSSSSNPNLFYVYALSIIITGLFWDKTLKKSKKIASIIIYKDQQTPVEKIYKI AEEFKYSSSNAIIKLASILNTPKEELLLIGKNTNYNIFIPHLNESHSALVKDELDYQIHYALETGNSALHQVQEKMDQSK TALILPIFGENKLISHFLISANKHDNATFSNEEISAIQWVLTKVQGYIESEQKVRQSQALANSIAHEMRNPLSQLQYHFE KIKHHYQKNTEHEKQEDLIKNELNQGCLAIQKGAQLIDIILSEAKNTTISDALFQHYSISLLTQQIIDEYVFDSEEMKQK ITLNLEDDFIVNINDTLYGFILFNLLRNATHYFDEYKSSISIRLVRGFATNKLIFRDTGPGIDSHILPNIFDDFFTHNKK GGSGLGLSYCLRVMHAFEGNIVCYSTKGEFTEFVLSFPRIEGNINALNTKPSSPPLIKDKDNSLKTVLIVDDKKVQRMLI HTFINKDNLTLLQAENGEEAVEMATNNKIDLIFMDSRMPIMNGIDAAKKIKILYPHLPIIALTGESSHEEISAITQVMDG YLTKPVSKTQLLQVVDKWL >Mature_819_residues MLTTLPKVYLLLTTSAIILLWVGYFIRSLYRERTKVNPYIYSSYIFYAFFIILWILSNAYFQSPLLTYFDESVAIFMALF ANMTSYLAFAFAFLFSCRLASKHSDKRLSKWQFGLTSITTLVALIVNVIPNLTVIGVTIQAPSVFTIEFGPFAPLFFLNA FLFVILTSINFFKLRKSNIKLNKEKSVYLMIGIFIYMISTIASQIIIPVIWADFSYTWLPPTLSVTEALLIGYTLLYHRL YSFKYLLFWSLSYSINLILYITPIVIIYSSSSNPNLFYVYALSIIITGLFWDKTLKKSKKIASIIIYKDQQTPVEKIYKI AEEFKYSSSNAIIKLASILNTPKEELLLIGKNTNYNIFIPHLNESHSALVKDELDYQIHYALETGNSALHQVQEKMDQSK TALILPIFGENKLISHFLISANKHDNATFSNEEISAIQWVLTKVQGYIESEQKVRQSQALANSIAHEMRNPLSQLQYHFE KIKHHYQKNTEHEKQEDLIKNELNQGCLAIQKGAQLIDIILSEAKNTTISDALFQHYSISLLTQQIIDEYVFDSEEMKQK ITLNLEDDFIVNINDTLYGFILFNLLRNATHYFDEYKSSISIRLVRGFATNKLIFRDTGPGIDSHILPNIFDDFFTHNKK GGSGLGLSYCLRVMHAFEGNIVCYSTKGEFTEFVLSFPRIEGNINALNTKPSSPPLIKDKDNSLKTVLIVDDKKVQRMLI HTFINKDNLTLLQAENGEEAVEMATNNKIDLIFMDSRMPIMNGIDAAKKIKILYPHLPIIALTGESSHEEISAITQVMDG YLTKPVSKTQLLQVVDKWL
Specific function: At low cell density, in the absence of AI-1 (autoinducer 1), luxN has a kinase activity and autophosphorylates on His-471. The phosphoryl group is then transferred on Asp-771 of the response regulator domain. The phosphoryl group is transferred to luxU, a
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=375, Percent_Identity=23.4666666666667, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI48994928, Length=252, Percent_Identity=25.3968253968254, Blast_Score=77, Evalue=6e-15, Organism=Escherichia coli, GI87081816, Length=393, Percent_Identity=23.6641221374046, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 93778; Mature: 93778
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTLPKVYLLLTTSAIILLWVGYFIRSLYRERTKVNPYIYSSYIFYAFFIILWILSNAY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FQSPLLTYFDESVAIFMALFANMTSYLAFAFAFLFSCRLASKHSDKRLSKWQFGLTSITT HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHH LVALIVNVIPNLTVIGVTIQAPSVFTIEFGPFAPLFFLNAFLFVILTSINFFKLRKSNIK HHHHHHHHHCCCEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCCE LNKEKSVYLMIGIFIYMISTIASQIIIPVIWADFSYTWLPPTLSVTEALLIGYTLLYHRL ECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHH YSFKYLLFWSLSYSINLILYITPIVIIYSSSSNPNLFYVYALSIIITGLFWDKTLKKSKK HHHHHHHHEEHHHHEEEEEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHC IASIIIYKDQQTPVEKIYKIAEEFKYSSSNAIIKLASILNTPKEELLLIGKNTNYNIFIP EEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHEEEHHHHCCCHHHEEEEECCCCEEEEEC HLNESHSALVKDELDYQIHYALETGNSALHQVQEKMDQSKTALILPIFGENKLISHFLIS CCCCCCCHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHC ANKHDNATFSNEEISAIQWVLTKVQGYIESEQKVRQSQALANSIAHEMRNPLSQLQYHFE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH KIKHHYQKNTEHEKQEDLIKNELNQGCLAIQKGAQLIDIILSEAKNTTISDALFQHYSIS HHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH LLTQQIIDEYVFDSEEMKQKITLNLEDDFIVNINDTLYGFILFNLLRNATHYFDEYKSSI HHHHHHHHHHHCCCHHHHCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCE SIRLVRGFATNKLIFRDTGPGIDSHILPNIFDDFFTHNKKGGSGLGLSYCLRVMHAFEGN EEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC IVCYSTKGEFTEFVLSFPRIEGNINALNTKPSSPPLIKDKDNSLKTVLIVDDKKVQRMLI EEEEECCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH HTFINKDNLTLLQAENGEEAVEMATNNKIDLIFMDSRMPIMNGIDAAKKIKILYPHLPII HHHHCCCCEEEEEECCCCHHHHHHCCCCEEEEEECCCCCHHCCCCCHHEEEEEECCCCEE ALTGESSHEEISAITQVMDGYLTKPVSKTQLLQVVDKWL EEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure MLTTLPKVYLLLTTSAIILLWVGYFIRSLYRERTKVNPYIYSSYIFYAFFIILWILSNAY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FQSPLLTYFDESVAIFMALFANMTSYLAFAFAFLFSCRLASKHSDKRLSKWQFGLTSITT HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHH LVALIVNVIPNLTVIGVTIQAPSVFTIEFGPFAPLFFLNAFLFVILTSINFFKLRKSNIK HHHHHHHHHCCCEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCCE LNKEKSVYLMIGIFIYMISTIASQIIIPVIWADFSYTWLPPTLSVTEALLIGYTLLYHRL ECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHH YSFKYLLFWSLSYSINLILYITPIVIIYSSSSNPNLFYVYALSIIITGLFWDKTLKKSKK HHHHHHHHEEHHHHEEEEEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHC IASIIIYKDQQTPVEKIYKIAEEFKYSSSNAIIKLASILNTPKEELLLIGKNTNYNIFIP EEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHEEEHHHHCCCHHHEEEEECCCCEEEEEC HLNESHSALVKDELDYQIHYALETGNSALHQVQEKMDQSKTALILPIFGENKLISHFLIS CCCCCCCHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHC ANKHDNATFSNEEISAIQWVLTKVQGYIESEQKVRQSQALANSIAHEMRNPLSQLQYHFE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH KIKHHYQKNTEHEKQEDLIKNELNQGCLAIQKGAQLIDIILSEAKNTTISDALFQHYSIS HHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH LLTQQIIDEYVFDSEEMKQKITLNLEDDFIVNINDTLYGFILFNLLRNATHYFDEYKSSI HHHHHHHHHHHCCCHHHHCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCE SIRLVRGFATNKLIFRDTGPGIDSHILPNIFDDFFTHNKKGGSGLGLSYCLRVMHAFEGN EEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC IVCYSTKGEFTEFVLSFPRIEGNINALNTKPSSPPLIKDKDNSLKTVLIVDDKKVQRMLI EEEEECCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH HTFINKDNLTLLQAENGEEAVEMATNNKIDLIFMDSRMPIMNGIDAAKKIKILYPHLPII HHHHCCCCEEEEEECCCCHHHHHHCCCCEEEEEECCCCCHHCCCCCHHEEEEEECCCCEE ALTGESSHEEISAITQVMDGYLTKPVSKTQLLQVVDKWL EEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8231809 [H]