Click here to switch to the map view.

The map label for this gene is ybfF [C]

Identifier: 59711458

GI number: 59711458

Start: 935935

End: 937626

Strand: Direct

Name: ybfF [C]

Synonym: VF_0851

Alternate gene names: 59711458

Gene position: 935935-937626 (Clockwise)

Preceding gene: 59711457

Following gene: 59711459

Centisome position: 32.3

GC content: 39.18

Gene sequence:

>1692_bases
ATGACTAACTTTCGCCCTTGTTTTTTAATTCCTTGTTATAACCATGGTAAAACCATTCCTGCCGTTGTTGAATCATTGAT
GTCGTATGGTTATCCAATGATCATCGTTGATGATGGCAGTGAGAATGAAACAAAGCGTATTTTAGAAGAAGTAACTCAAC
ATAATGAGTCAATTACCTTAATCACATTGGCTGAAAACCAAGGTAAAGGTGGGGCTGTGATTGCTGGTATCGAAAAAGCC
TATCAGCAGAGTTACAGTCATGCGATTCAAATTGATGCTGATGGTCAACATGATCTCGAAGCGCTACCTAAATTAATCGC
TGAATCTCAAGAACACCCAACGGCACTGATTTCTGGACAGCCTATTTACGATGAGAGTGTACCTAAATCTCGTTTGTATG
GTCGCTATGCTACGCATATTTGGGTGTGGATTGAGACACTTTCTTTTACCATTAAAGACAGTATGTGTGGTTTCCGCTCT
TATCCTATCGGTCCAACGATTAACGTATTAGAGCGAGCGGTGCTTGGCCGACGAATGGATTTTGATACCGAAATCATGGT
TCGTATGTACTGGAATGAAACCGATATTCGCTTCATCAATACTCGTGTTATTTACCCAGAGGATGGCATTTCTCATTTTG
ATGCATTATGGGATAACGTGAAAATCAGTTGGATGCATACCAAATTATTTTTTGGCATGCTGCCTCGTATTCCGTCATTA
CTAAAACGTAAACCTGTTCAAGAAGATCATTGGTCGTCTCATGCTGAGCGCGGTACGATTTTAGGTATTCAATTTTTACT
TTGGATCTATTCAACGTTTGGTCGCAAGGTATTTTCACTATTACTCAAACCAGTCATGGCTTATTACTACCTACGTGGTG
GTTCAGTCAAAGACGCTTCTGATGATTTCATTCAACAGGTAAATGCTTATGCTCGAATTAAAGGCATTCAATTACCTGAA
AAGCTAACCACTTATCGTCATTTGGTCTCTTTTGGTGAAACCATGTTAGATAAGCTTGCGGCATGGCGTGGTGATTTTTC
AGATAAAAACTTAACGGTTCATGGTATTGAGCATTATCAAACATTAGCTCAGCGTGAAAAAGGCATTGTATTATTGGGTT
CTCATTTAGGAAATCTAGAACTATGTCGTGCGCTTAGCCGTCGTCATACTCACCTGAAGATTAATGCGTTAGTTTTTACT
GAGCATGCAGAGCGTTTTAATACGGTAATGAAAACCGTTAATCCGCAATCAGAAGTGAATGTTATTCAGGTGTCTAAAAT
AGGGCCAGATACCGCCATTTTATTGCAGCAAAAAATTGATGATGGTGAGTGGATTGTTATCGTTGGTGATAGAACGTCAG
TCACTAAAGAGAATCGAGTGATTTGGGCTGATTTTCTTGGTAAGCCTGCGCCATTTCCTCAAGGGCCATTTATGTTGGCC
TCTATTTTAAAGCAACCAGTATATTTAATGTTTGGGCTTCGTGACGATACACAAAAAGATCCGTTGTTTGATGTGTATTT
AGAACCGTTTTCTGAACAAATCATATTACCTCGTGGTAAGCGAGAAGAGGCTTTGCAAGAAGTCGTACAAAATTATGCTC
AACGTCTAGAGCATTTCACATTAAAAGCACCATCACAATGGTATAACTTTTTTAATTTTTGGCAGTTAACTGGAAAGAAA
GATGACAACTAA

Upstream 100 bases:

>100_bases
GGGATATTGAGAAGAGTAAGCTGTATTTTACTTACCGCTCAAATAAAGGCGATACGGTAAGCAATCATGCTTCTGGTCGT
ATTGTGTTAGGAGCGTAATC

Downstream 100 bases:

>100_bases
TTCAATTACATTTGGTAAAGGACGTCTGACAATTGAAGACGTTGTTGATATTGCAAATGGTGCAAATGCACAACTTAATA
ATTCTGATGAATTCACTGCC

Product: acyltransferase

Products: NA

Alternate protein names: Lipid A Biosynthesis Acyltransferase; Acyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family; Dolichyl-Phosphate Mannose Synthase; Family 2 Glycosyl Transferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Transmembrane Family-2 Glycosyl Transferase; Acetyltransferase; B-Glycosyltransferase Glycosyltransferase Family 2 Protein; Lipid IVA Acyltransferase Family Protein; Glycosyl Transferase Family 2 And Acyltransferase Domains; Dolichol-Phosphate Mannosyltransferase; Glycosyl Transferase GT2 Family; Acyltransferase-Like Protein; Lipid A Biosynthesis Acyltransferase Family; Bacterial Lipid A Biosynthesis Acyltransferase Family; Family 2 Glycosyltransferase; Oligosaccharide Acyltransferase Family Protein; Glycosyltransferase YcbB; B-Glycosyltransferase; Bifunctional Glycosyl Transferase/Acyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyl Transferase Gt2J; Dolichyl-Phosphate Mannose Synthase-Like Protein; XanthomoNADin Biosynthesis Acyltransferase Protein; Glycosyl Transferase Domain-Containing Protein; Cell Wall Biosynthesis Glycosyltransferase

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MTNFRPCFLIPCYNHGKTIPAVVESLMSYGYPMIIVDDGSENETKRILEEVTQHNESITLITLAENQGKGGAVIAGIEKA
YQQSYSHAIQIDADGQHDLEALPKLIAESQEHPTALISGQPIYDESVPKSRLYGRYATHIWVWIETLSFTIKDSMCGFRS
YPIGPTINVLERAVLGRRMDFDTEIMVRMYWNETDIRFINTRVIYPEDGISHFDALWDNVKISWMHTKLFFGMLPRIPSL
LKRKPVQEDHWSSHAERGTILGIQFLLWIYSTFGRKVFSLLLKPVMAYYYLRGGSVKDASDDFIQQVNAYARIKGIQLPE
KLTTYRHLVSFGETMLDKLAAWRGDFSDKNLTVHGIEHYQTLAQREKGIVLLGSHLGNLELCRALSRRHTHLKINALVFT
EHAERFNTVMKTVNPQSEVNVIQVSKIGPDTAILLQQKIDDGEWIVIVGDRTSVTKENRVIWADFLGKPAPFPQGPFMLA
SILKQPVYLMFGLRDDTQKDPLFDVYLEPFSEQIILPRGKREEALQEVVQNYAQRLEHFTLKAPSQWYNFFNFWQLTGKK
DDN

Sequences:

>Translated_563_residues
MTNFRPCFLIPCYNHGKTIPAVVESLMSYGYPMIIVDDGSENETKRILEEVTQHNESITLITLAENQGKGGAVIAGIEKA
YQQSYSHAIQIDADGQHDLEALPKLIAESQEHPTALISGQPIYDESVPKSRLYGRYATHIWVWIETLSFTIKDSMCGFRS
YPIGPTINVLERAVLGRRMDFDTEIMVRMYWNETDIRFINTRVIYPEDGISHFDALWDNVKISWMHTKLFFGMLPRIPSL
LKRKPVQEDHWSSHAERGTILGIQFLLWIYSTFGRKVFSLLLKPVMAYYYLRGGSVKDASDDFIQQVNAYARIKGIQLPE
KLTTYRHLVSFGETMLDKLAAWRGDFSDKNLTVHGIEHYQTLAQREKGIVLLGSHLGNLELCRALSRRHTHLKINALVFT
EHAERFNTVMKTVNPQSEVNVIQVSKIGPDTAILLQQKIDDGEWIVIVGDRTSVTKENRVIWADFLGKPAPFPQGPFMLA
SILKQPVYLMFGLRDDTQKDPLFDVYLEPFSEQIILPRGKREEALQEVVQNYAQRLEHFTLKAPSQWYNFFNFWQLTGKK
DDN
>Mature_562_residues
TNFRPCFLIPCYNHGKTIPAVVESLMSYGYPMIIVDDGSENETKRILEEVTQHNESITLITLAENQGKGGAVIAGIEKAY
QQSYSHAIQIDADGQHDLEALPKLIAESQEHPTALISGQPIYDESVPKSRLYGRYATHIWVWIETLSFTIKDSMCGFRSY
PIGPTINVLERAVLGRRMDFDTEIMVRMYWNETDIRFINTRVIYPEDGISHFDALWDNVKISWMHTKLFFGMLPRIPSLL
KRKPVQEDHWSSHAERGTILGIQFLLWIYSTFGRKVFSLLLKPVMAYYYLRGGSVKDASDDFIQQVNAYARIKGIQLPEK
LTTYRHLVSFGETMLDKLAAWRGDFSDKNLTVHGIEHYQTLAQREKGIVLLGSHLGNLELCRALSRRHTHLKINALVFTE
HAERFNTVMKTVNPQSEVNVIQVSKIGPDTAILLQQKIDDGEWIVIVGDRTSVTKENRVIWADFLGKPAPFPQGPFMLAS
ILKQPVYLMFGLRDDTQKDPLFDVYLEPFSEQIILPRGKREEALQEVVQNYAQRLEHFTLKAPSQWYNFFNFWQLTGKKD
DN

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7019323, Length=177, Percent_Identity=29.9435028248588, Blast_Score=72, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64682; Mature: 64551

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNFRPCFLIPCYNHGKTIPAVVESLMSYGYPMIIVDDGSENETKRILEEVTQHNESITL
CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEE
ITLAENQGKGGAVIAGIEKAYQQSYSHAIQIDADGQHDLEALPKLIAESQEHPTALISGQ
EEEECCCCCCCEEEHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCC
PIYDESVPKSRLYGRYATHIWVWIETLSFTIKDSMCGFRSYPIGPTINVLERAVLGRRMD
CCCCCCCCHHHHHHHHHHHEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCC
FDTEIMVRMYWNETDIRFINTRVIYPEDGISHFDALWDNVKISWMHTKLFFGMLPRIPSL
CCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH
LKRKPVQEDHWSSHAERGTILGIQFLLWIYSTFGRKVFSLLLKPVMAYYYLRGGSVKDAS
HHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
DDFIQQVNAYARIKGIQLPEKLTTYRHLVSFGETMLDKLAAWRGDFSDKNLTVHGIEHYQ
HHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHH
TLAQREKGIVLLGSHLGNLELCRALSRRHTHLKINALVFTEHAERFNTVMKTVNPQSEVN
HHHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHHHCCCCCCCE
VIQVSKIGPDTAILLQQKIDDGEWIVIVGDRTSVTKENRVIWADFLGKPAPFPQGPFMLA
EEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEHHHCCCCCCCCCCHHHHH
SILKQPVYLMFGLRDDTQKDPLFDVYLEPFSEQIILPRGKREEALQEVVQNYAQRLEHFT
HHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHEE
LKAPSQWYNFFNFWQLTGKKDDN
CCCCHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure 
TNFRPCFLIPCYNHGKTIPAVVESLMSYGYPMIIVDDGSENETKRILEEVTQHNESITL
CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEE
ITLAENQGKGGAVIAGIEKAYQQSYSHAIQIDADGQHDLEALPKLIAESQEHPTALISGQ
EEEECCCCCCCEEEHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCC
PIYDESVPKSRLYGRYATHIWVWIETLSFTIKDSMCGFRSYPIGPTINVLERAVLGRRMD
CCCCCCCCHHHHHHHHHHHEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCC
FDTEIMVRMYWNETDIRFINTRVIYPEDGISHFDALWDNVKISWMHTKLFFGMLPRIPSL
CCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH
LKRKPVQEDHWSSHAERGTILGIQFLLWIYSTFGRKVFSLLLKPVMAYYYLRGGSVKDAS
HHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
DDFIQQVNAYARIKGIQLPEKLTTYRHLVSFGETMLDKLAAWRGDFSDKNLTVHGIEHYQ
HHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHH
TLAQREKGIVLLGSHLGNLELCRALSRRHTHLKINALVFTEHAERFNTVMKTVNPQSEVN
HHHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHHHCCCCCCCE
VIQVSKIGPDTAILLQQKIDDGEWIVIVGDRTSVTKENRVIWADFLGKPAPFPQGPFMLA
EEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEHHHCCCCCCCCCCHHHHH
SILKQPVYLMFGLRDDTQKDPLFDVYLEPFSEQIILPRGKREEALQEVVQNYAQRLEHFT
HHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHEE
LKAPSQWYNFFNFWQLTGKKDDN
CCCCHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA