| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is adk [H]
Identifier: 59711400
GI number: 59711400
Start: 867800
End: 868444
Strand: Direct
Name: adk [H]
Synonym: VF_0793
Alternate gene names: 59711400
Gene position: 867800-868444 (Clockwise)
Preceding gene: 59711399
Following gene: 59711401
Centisome position: 29.95
GC content: 43.1
Gene sequence:
>645_bases ATGCGTATCATCCTTTTAGGTGCACCAGGTGCGGGTAAAGGTACTCAAGCTCAGTTCATCATGGATAAATATGGTATTCC ACAAATCTCTACAGGTGACATGCTACGTGCTGCAATCAAAGCTGGCACTGAGCTTGGTAAACAAGCAAAATCTGTAATTG ATGCTGGTCAACTTGTATCTGATGAGATCATCCTTGGTCTTGTTAAAGAGCGTATTGCTCAAGAAGATTGCGCTAAAGGT TTCCTACTAGATGGTTTCCCTCGTACAATTCCTCAAGCTGATGGCCTAAAAGAGAACGGTGTATCTATCGATTACGTTCT TGAGTTTGACGTTGCTGACGAAGTTATCGTTGAGCGTATGTCTGGTCGTCGTGCTCACCTTCCTTCAGGTCGTACTTACC ACGTAGTGTACAACCCACCAAAAGAAGAAGGTAAAGACGACGAAACTGGCGAACCTCTTGTTATCCGTGAAGATGATAAG CCTGAGACAGTACTTGCTCGTTTAGGTATCTACCATGAGCAAACTGCACCGCTTATCGCTTACTACAACAAAGAAGCTGA AGCAGGCAACACTAAGTACCTTAAATTTGATGGTACTAAATTAGTTGCTGAAGTAAGTGCTGAAATCGAAAAAGCACTAG CGTAA
Upstream 100 bases:
>100_bases TAGAAATAAAACTTATACCTAAGTTTATAAATATAGGTTAGGTAACTTTTATTTGTAAGGTTTGGTATAAATTCCAAGAT TATTTTTTAAGGGGAAAACA
Downstream 100 bases:
>100_bases TCTTACGTAGTCAGTAATTTATTGCTATATTGAAGCGGCCTTTTATAGGTCGCTTTTTTTATGGAAAATAAATAGGTAAT TGACAGTGAATAATAAAAAG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRIILLGAPGAGKGTQAQFIMDKYGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDEIILGLVKERIAQEDCAKG FLLDGFPRTIPQADGLKENGVSIDYVLEFDVADEVIVERMSGRRAHLPSGRTYHVVYNPPKEEGKDDETGEPLVIREDDK PETVLARLGIYHEQTAPLIAYYNKEAEAGNTKYLKFDGTKLVAEVSAEIEKALA
Sequences:
>Translated_214_residues MRIILLGAPGAGKGTQAQFIMDKYGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDEIILGLVKERIAQEDCAKG FLLDGFPRTIPQADGLKENGVSIDYVLEFDVADEVIVERMSGRRAHLPSGRTYHVVYNPPKEEGKDDETGEPLVIREDDK PETVLARLGIYHEQTAPLIAYYNKEAEAGNTKYLKFDGTKLVAEVSAEIEKALA >Mature_214_residues MRIILLGAPGAGKGTQAQFIMDKYGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDEIILGLVKERIAQEDCAKG FLLDGFPRTIPQADGLKENGVSIDYVLEFDVADEVIVERMSGRRAHLPSGRTYHVVYNPPKEEGKDDETGEPLVIREDDK PETVLARLGIYHEQTAPLIAYYNKEAEAGNTKYLKFDGTKLVAEVSAEIEKALA
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=188, Percent_Identity=48.4042553191489, Blast_Score=193, Evalue=1e-49, Organism=Homo sapiens, GI4502013, Length=188, Percent_Identity=48.4042553191489, Blast_Score=193, Evalue=1e-49, Organism=Homo sapiens, GI19923437, Length=185, Percent_Identity=44.8648648648649, Blast_Score=169, Evalue=2e-42, Organism=Homo sapiens, GI310110345, Length=182, Percent_Identity=43.4065934065934, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI53832003, Length=182, Percent_Identity=43.4065934065934, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI8051579, Length=182, Percent_Identity=43.4065934065934, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI53832001, Length=182, Percent_Identity=43.4065934065934, Blast_Score=151, Evalue=4e-37, Organism=Homo sapiens, GI4502011, Length=183, Percent_Identity=32.2404371584699, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI22749187, Length=182, Percent_Identity=29.1208791208791, Blast_Score=91, Evalue=6e-19, Organism=Homo sapiens, GI28144897, Length=187, Percent_Identity=28.8770053475936, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI28144899, Length=187, Percent_Identity=28.8770053475936, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI7706497, Length=215, Percent_Identity=31.1627906976744, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI237858799, Length=139, Percent_Identity=26.6187050359712, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI21450759, Length=139, Percent_Identity=26.6187050359712, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1786680, Length=213, Percent_Identity=74.6478873239437, Blast_Score=332, Evalue=1e-92, Organism=Caenorhabditis elegans, GI17552384, Length=218, Percent_Identity=43.5779816513761, Blast_Score=196, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17537943, Length=213, Percent_Identity=33.8028169014084, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17567503, Length=182, Percent_Identity=35.1648351648352, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17550688, Length=186, Percent_Identity=30.1075268817204, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17533833, Length=186, Percent_Identity=29.0322580645161, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6320432, Length=189, Percent_Identity=47.6190476190476, Blast_Score=191, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6321018, Length=194, Percent_Identity=43.298969072165, Blast_Score=147, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322828, Length=214, Percent_Identity=29.9065420560748, Blast_Score=97, Evalue=2e-21, Organism=Drosophila melanogaster, GI22026816, Length=211, Percent_Identity=43.6018957345972, Blast_Score=186, Evalue=8e-48, Organism=Drosophila melanogaster, GI17737899, Length=185, Percent_Identity=47.027027027027, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI24645822, Length=185, Percent_Identity=47.027027027027, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI17647141, Length=181, Percent_Identity=30.939226519337, Blast_Score=98, Evalue=3e-21, Organism=Drosophila melanogaster, GI24663208, Length=181, Percent_Identity=30.939226519337, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI221459597, Length=213, Percent_Identity=29.5774647887324, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI21356893, Length=213, Percent_Identity=29.5774647887324, Blast_Score=88, Evalue=4e-18,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 [H]
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 23317; Mature: 23317
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIILLGAPGAGKGTQAQFIMDKYGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVS CEEEEEECCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIILGLVKERIAQEDCAKGFLLDGFPRTIPQADGLKENGVSIDYVLEFDVADEVIVERM HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHH SGRRAHLPSGRTYHVVYNPPKEEGKDDETGEPLVIREDDKPETVLARLGIYHEQTAPLIA CCCEEECCCCCEEEEEECCCHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCEEE YYNKEAEAGNTKYLKFDGTKLVAEVSAEIEKALA EECCCCCCCCEEEEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRIILLGAPGAGKGTQAQFIMDKYGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVS CEEEEEECCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIILGLVKERIAQEDCAKGFLLDGFPRTIPQADGLKENGVSIDYVLEFDVADEVIVERM HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHH SGRRAHLPSGRTYHVVYNPPKEEGKDDETGEPLVIREDDKPETVLARLGIYHEQTAPLIA CCCEEECCCCCEEEEEECCCHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCEEE YYNKEAEAGNTKYLKFDGTKLVAEVSAEIEKALA EECCCCCCCCEEEEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA