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The map label for this gene is sirB2 [H]

Identifier: 59711377

GI number: 59711377

Start: 840334

End: 840717

Strand: Direct

Name: sirB2 [H]

Synonym: VF_0770

Alternate gene names: 59711377

Gene position: 840334-840717 (Clockwise)

Preceding gene: 59711376

Following gene: 59711378

Centisome position: 29.0

GC content: 35.42

Gene sequence:

>384_bases
ATGTATACCGCAGTTAAACACATACACTTATTATTAGTCGCTTGTAGCGTATTGTTTTTTGTCGTTCGCTATTGTTTGAT
GATGGCAAATTCTGACATTCGTAATAATGGCTTCTTTAAGCGTGTTCCTCACGTTGTTGATTCAGCAATGCTACTTAGTG
GTATTTGGCTTATTTTTATTACTGGATTCATTCCATTTACGTCATCTGCACCTTGGTTAACAGAAAAAATTACCTGTATT
ATGGTTTACCTTGCTTTAGGTGTGGTTACTTTAAATAATGGTAAAAACAAAGTCTTTAAGACCTTTGCATTTTTAGGTGC
AATGGGTTGGTTAATGGTTGCTGCTAAAATTGCGGTAACAAAAGTACCAACGTTCTTGGGGTAA

Upstream 100 bases:

>100_bases
GCATGGTTATATTAATGTGAAAACAGAGCAAGATTATGCTGGCAATGACCGAGTTACTTTAGGTCAATGGGTAGTAGATA
ACTAGAATAAAGGATAATTC

Downstream 100 bases:

>100_bases
TTATGTTCCAACTGTGTGATGAAAATTTAGATGAACGCACTTTAGCTGAAGGAGCATTAGAGCTTAATTTAGCGATAAAC
CCCGATACTGAAATACATTG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MYTAVKHIHLLLVACSVLFFVVRYCLMMANSDIRNNGFFKRVPHVVDSAMLLSGIWLIFITGFIPFTSSAPWLTEKITCI
MVYLALGVVTLNNGKNKVFKTFAFLGAMGWLMVAAKIAVTKVPTFLG

Sequences:

>Translated_127_residues
MYTAVKHIHLLLVACSVLFFVVRYCLMMANSDIRNNGFFKRVPHVVDSAMLLSGIWLIFITGFIPFTSSAPWLTEKITCI
MVYLALGVVTLNNGKNKVFKTFAFLGAMGWLMVAAKIAVTKVPTFLG
>Mature_127_residues
MYTAVKHIHLLLVACSVLFFVVRYCLMMANSDIRNNGFFKRVPHVVDSAMLLSGIWLIFITGFIPFTSSAPWLTEKITCI
MVYLALGVVTLNNGKNKVFKTFAFLGAMGWLMVAAKIAVTKVPTFLG

Specific function: Unknown

COG id: COG3094

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787464, Length=124, Percent_Identity=32.258064516129, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007360 [H]

Pfam domain/function: PF04247 SirB [H]

EC number: NA

Molecular weight: Translated: 14124; Mature: 14124

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTAVKHIHLLLVACSVLFFVVRYCLMMANSDIRNNGFFKRVPHVVDSAMLLSGIWLIFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TGFIPFTSSAPWLTEKITCIMVYLALGVVTLNNGKNKVFKTFAFLGAMGWLMVAAKIAVT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KVPTFLG
HCCCCCC
>Mature Secondary Structure
MYTAVKHIHLLLVACSVLFFVVRYCLMMANSDIRNNGFFKRVPHVVDSAMLLSGIWLIFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TGFIPFTSSAPWLTEKITCIMVYLALGVVTLNNGKNKVFKTFAFLGAMGWLMVAAKIAVT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KVPTFLG
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7543480; 8905232; 9278503 [H]