| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is ybeL [H]
Identifier: 59711361
GI number: 59711361
Start: 822726
End: 823208
Strand: Direct
Name: ybeL [H]
Synonym: VF_0754
Alternate gene names: 59711361
Gene position: 822726-823208 (Clockwise)
Preceding gene: 59711348
Following gene: 59711367
Centisome position: 28.39
GC content: 39.54
Gene sequence:
>483_bases ATGTCTAAGCAAAAAACGGGTTATAACGCCGTCTTTGAACGAGTAATGAATGTATTAGAAAGAAGTCCTGAAGAGTTTGA ACATTGGGCGAAGTCTTCAGAAGAAGTGGTGGATGCCGCTTCTGATATGACCAAAGATGAGCTTGCTCTTATTTCAACGT ATGTTAAACGTGATATTAAAGAGTTTGCTCAAAGTTATGAAGAGAGCAAAAACACATTTCCTGATTCGCCTTTTTACCGC TTAATTGCCGATTCAATTTGGCACGGCTTATTGGAAATAACCGATAGAACACAAGTTGAATGGAAAGAGGTCTTTGATGA TTTGGAACATCAAGGGGTTTATCAGGCTGGGGAGGTGATCGGTTTAGGTATTCTAGTGTGTGAAAAGTGTGGGCACCGAG AACAATTTAACCACGCTCAAATCATAGAGCCGTGTACTCACTGTCAACATGAAGAATTTACAAGAGTTTCTTTAAAACCT TAG
Upstream 100 bases:
>100_bases TCGGCATAGAATAACTAATGGAGCGCTTATACTCAAGCGACCTGATAACCTTTAACTCACTCTTCGCTATATAAATCTAG CGAAATCTTGGAGGTGACTT
Downstream 100 bases:
>100_bases TTTAAAAGGCTATTGGTTAAAGGTCTGTATATCAAAATAAAAGAAATACAGACCGTATGAAATTACATATTGTCTTTTCG TTTACGCCAAGCAACAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSKQKTGYNAVFERVMNVLERSPEEFEHWAKSSEEVVDAASDMTKDELALISTYVKRDIKEFAQSYEESKNTFPDSPFYR LIADSIWHGLLEITDRTQVEWKEVFDDLEHQGVYQAGEVIGLGILVCEKCGHREQFNHAQIIEPCTHCQHEEFTRVSLKP
Sequences:
>Translated_160_residues MSKQKTGYNAVFERVMNVLERSPEEFEHWAKSSEEVVDAASDMTKDELALISTYVKRDIKEFAQSYEESKNTFPDSPFYR LIADSIWHGLLEITDRTQVEWKEVFDDLEHQGVYQAGEVIGLGILVCEKCGHREQFNHAQIIEPCTHCQHEEFTRVSLKP >Mature_159_residues SKQKTGYNAVFERVMNVLERSPEEFEHWAKSSEEVVDAASDMTKDELALISTYVKRDIKEFAQSYEESKNTFPDSPFYRL IADSIWHGLLEITDRTQVEWKEVFDDLEHQGVYQAGEVIGLGILVCEKCGHREQFNHAQIIEPCTHCQHEEFTRVSLKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786863, Length=160, Percent_Identity=38.125, Blast_Score=123, Evalue=6e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009912 [H]
Pfam domain/function: PF07295 DUF1451 [H]
EC number: NA
Molecular weight: Translated: 18571; Mature: 18440
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQKTGYNAVFERVMNVLERSPEEFEHWAKSSEEVVDAASDMTKDELALISTYVKRDIK CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH EFAQSYEESKNTFPDSPFYRLIADSIWHGLLEITDRTQVEWKEVFDDLEHQGVYQAGEVI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHH GLGILVCEKCGHREQFNHAQIIEPCTHCQHEEFTRVSLKP HHHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHHHHCCCCC >Mature Secondary Structure SKQKTGYNAVFERVMNVLERSPEEFEHWAKSSEEVVDAASDMTKDELALISTYVKRDIK CCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH EFAQSYEESKNTFPDSPFYRLIADSIWHGLLEITDRTQVEWKEVFDDLEHQGVYQAGEVI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHH GLGILVCEKCGHREQFNHAQIIEPCTHCQHEEFTRVSLKP HHHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]